General information
PDB ID 1BC8
Title STRUCTURES OF SAP-1 BOUND TO DNA SEQUENCES FROM THE E74 AND C-FOS PROMOTERS PROVIDE INSIGHTS INTO HOW ETS PROTEINS DISCRIMINATE BETWEEN RELATED DNA TARGETS
PDB header TRANSCRIPTION/DNA
Date 1998-05-05
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.93
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1bc8.pdb C AB 0
Biounits:
1bc8.pdb1.pdb C AB 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ets Domain P28324_6-85 5.2e-36 1 CL0123 C 6 85 AB  H-Bb H-Mj S-Bb L-Bb 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: ets domain
Serum response factor accessory protein 1a, SAP-1 C N/A N/A AB  H-Bb H-Mj L-Bb 
GO terms
Protein chains: GO type: GO description:
C=1-93 C cytosol
C=1-93 C nuclear chromatin
C=1-93 C nucleoplasm
C=1-93 C nucleus
C=1-93 F chromatin binding
C=1-93 F DNA binding
C=1-93 F DNA-binding transcription activator activity, RNA polymerase II-specific
C=1-93 F DNA-binding transcription factor activity
C=1-93 F DNA-binding transcription factor activity, RNA polymerase II-specific
C=1-93 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
C=1-93 F sequence-specific double-stranded DNA binding
C=1-93 P cell differentiation
C=1-93 P histone H3 deacetylation
C=1-93 P negative regulation of transcription by RNA polymerase II
C=1-93 P positive regulation of transcription by RNA polymerase II
C=1-93 P regulation of transcription by RNA polymerase II
Sequences
Download file with secondary structure created by Stride  
1bc8.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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C (protein): 
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