General information
PDB ID 1FLO
Title FLP RECOMBINASE-HOLLIDAY JUNCTION COMPLEX I
PDB header LIGASE, LYASE/DNA
Date 2000-08-14
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.65
Kind dna
Organism SACCHAROMYCES CEREVISIAE
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1flo.pdb ABCD EFGHIJKL 0
Biounits:
1flo.pdb1.pdb ABCD EFGHIJKL 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Flp_N Domain P03870_44-128 1.4e-25 1 CL0469 A 44 128 EF   
Flp_N Domain P03870_44-128 5.3e-30 1 CL0469 B 44 128 GH   
Flp_N Domain P03870_44-128 5.2e-30 1 CL0469 C 44 128 IJ   
Flp_N Domain P03870_44-128 5.3e-30 1 CL0469 D 44 128 KL   
Flp_C Family P03870_137-379 1.4e-122 1 CL0382 A 137 379 EFJ   
Flp_C Family P03870_137-379 6.9e-120 1 CL0382 B 137 379 GHL   
Flp_C Family P03870_137-379 1.6e-124 1 CL0382 C 137 379 HIJ   
Flp_C Family P03870_137-379 5.5e-126 1 CL0382 D 129 379 FKL   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Flp recombinase A 2 129 EF  H-Bb H-Mj L-Bb L-Mj 
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Flp recombinase B 2 129 GH  H-Bb H-Mj L-Bb L-Mj 
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Flp recombinase C 2 129 IJ  H-Bb H-Mj L-Bb L-Mj 
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Flp recombinase D 2 129 KL  H-Bb H-Mj L-Bb L-Mj 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Flp recombinase A 135 423 EFJ  H-Bb H-Mj L-Bb 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Flp recombinase B 135 423 GHL  H-Bb H-Mj L-Bb 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Flp recombinase C 137 423 HIJ  H-Bb H-Mj L-Bb 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Flp recombinase D 138 423 FKL  H-Bb H-Mj L-Bb 
GO terms
Protein chains: GO type: GO description:
A/B/C/D=2-423 F DNA binding, bending
A/B/C/D=2-423 F double-stranded DNA binding
A/B/C/D=2-423 F single-stranded DNA binding
A/B/C/D=2-423 F site-specific recombinase activity
A/B/C/D=2-423 P DNA integration
A/B/C/D=2-423 P plasmid recombination
Sequences
Download file with secondary structure created by Stride  
1flo.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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G (dna): 
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H (dna): 
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I (dna): 
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J (dna): 
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K (dna): 
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L (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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