General information
PDB ID 1JJ4
Title HUMAN PAPILLOMAVIRUS TYPE 18 E2 DNA-BINDING DOMAIN BOUND TO ITS DNA TARGET
PDB header TRANSCRIPTION/DNA
Date 2001-07-03
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.4
Kind dna
Organism HUMAN PAPILLOMAVIRUS TYPE 18
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1jj4.pdb AB CD 0
Biounits:
1jj4.pdb1.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
PPV_E2_C Domain P06790_288-363 1.1e-22 1 No_clan A 288 363 CD  H-Bb H-Mj S-Bb L-Bb 
PPV_E2_C Domain P06790_288-363 3e-23 1 No_clan B 288 363 CD  H-Bb H-Mj S-Bb L-Bb 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: Ferredoxin-like
    Superfamily: Viral DNA-binding domain
      Family: Viral DNA-binding domain
Papillomavirus-1 E2 protein A N/A N/A CD  H-Bb H-Mj L-Bb 
Class: Alpha and beta proteins (a+b)
  Fold: Ferredoxin-like
    Superfamily: Viral DNA-binding domain
      Family: Viral DNA-binding domain
Papillomavirus-1 E2 protein B N/A N/A CD  H-Bb H-Mj S-Bb L-Bb 
GO terms
Protein chains: GO type: GO description:
A/B=287-365 C host cell mitochondrial membrane
A/B=287-365 C host cell nucleus
A/B=287-365 C host cytoskeleton
A/B=287-365 F DNA binding
A/B=287-365 F DNA-binding transcription factor activity
A/B=287-365 F nucleotide binding
A/B=287-365 P DNA replication
A/B=287-365 P regulation of DNA replication
A/B=287-365 P transcription, DNA-templated
A/B=287-365 P viral DNA genome replication
Sequences
Download file with secondary structure created by Stride  
1jj4.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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