General information
PDB ID 1JT0
Title CRYSTAL STRUCTURE OF A COOPERATIVE QACR-DNA COMPLEX
PDB header TRANSCRIPTION/DNA
Date 2001-08-20
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.9
Kind dna
Organism STAPHYLOCOCCUS AUREUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1jt0.pdb ABCD EF 0
Biounits:
1jt0.pdb1.pdb ABCD EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
TetR_C_5 Domain P0A0N4_57-188 3.3e-59 1 CL0174 A 57 188   
TetR_N Domain P0A0N4_7-53 2.2e-14 1 CL0123 A 7 53 EF  H-Bb H-Mj L-Bb 
TetR_C_5 Domain P0A0N4_57-188 3.3e-59 1 CL0174 B 57 188   
TetR_N Domain P0A0N4_7-53 2.2e-14 1 CL0123 B 7 53 EF  H-Bb H-Mj L-Bb 
TetR_C_5 Domain P0A0N4_57-188 3.3e-59 1 CL0174 C 57 188   
TetR_N Domain P0A0N4_7-53 2.2e-14 1 CL0123 C 7 53 EF  H-Bb H-Mj L-Bb L-Mj 
TetR_C_5 Domain P0A0N4_57-188 3.7e-58 1 CL0174 D 57 186   
TetR_N Domain P0A0N4_7-53 2.1e-14 1 CL0123 D 7 53 EF  H-Bb H-Mj L-Bb L-Mj 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Tetracyclin repressor-like, N-terminal domain
Multidrug binding protein QacR A 2 72 EF -
Class: All alpha proteins
  Fold: Tetracyclin repressor-like, C-terminal domain
    Superfamily: Tetracyclin repressor-like, C-terminal domain
      Family: Tetracyclin repressor-like, C-terminal domain
Multidrug binding protein QacR A 73 189 -
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Tetracyclin repressor-like, N-terminal domain
Multidrug binding protein QacR B 2 72 EF -
Class: All alpha proteins
  Fold: Tetracyclin repressor-like, C-terminal domain
    Superfamily: Tetracyclin repressor-like, C-terminal domain
      Family: Tetracyclin repressor-like, C-terminal domain
Multidrug binding protein QacR B 73 189 -
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Tetracyclin repressor-like, N-terminal domain
Multidrug binding protein QacR C 2 72 EF -
Class: All alpha proteins
  Fold: Tetracyclin repressor-like, C-terminal domain
    Superfamily: Tetracyclin repressor-like, C-terminal domain
      Family: Tetracyclin repressor-like, C-terminal domain
Multidrug binding protein QacR C 73 189 -
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Tetracyclin repressor-like, N-terminal domain
Multidrug binding protein QacR D 2 72 EF -
Class: All alpha proteins
  Fold: Tetracyclin repressor-like, C-terminal domain
    Superfamily: Tetracyclin repressor-like, C-terminal domain
      Family: Tetracyclin repressor-like, C-terminal domain
Multidrug binding protein QacR D 73 186 -
GO terms
Protein chains: GO type: GO description:
A/B/C/D=1-188 F DNA binding
A/B/C/D=1-188 F DNA-binding transcription factor activity
A/B/C/D=1-188 P negative regulation of transcription, DNA-templated
Sequences
Download file with secondary structure created by Stride  
1jt0.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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