General information
PDB ID 1JWL
Title STRUCTURE OF THE DIMERIC LAC REPRESSOR/OPERATOR O1/ONPF COMPLEX
PDB header TRANSCRIPTION/DNA
Date 2001-09-04
Experimental method X-RAY DIFFRACTION
Resolution (A) 4
Kind dna
Organism ESCHERICHIA COLI
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1jwl.pdb ABC DE 0
Biounits:
1jwl.pdb1.pdb AB DE 1
1jwl.pdb2.pdb C 2
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Peripla_BP_3 Domain P03023_171-329 1.8e-31 1 CL0144 A 171 329   
LacI Domain P03023_5-50 2e-22 1 CL0123 A 5 50 D  H-Mj L-Bb L-Mj 
Peripla_BP_3 Domain P03023_171-329 1.8e-31 1 CL0144 B 171 329   
LacI Domain P03023_5-50 2e-22 1 CL0123 B 5 50 DE  H-Mj L-Bb L-Mj 
Peripla_BP_3 Domain P03023_171-329 1.1e-31 1 CL0144 C 171 329   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: lambda repressor-like DNA-binding domains
    Superfamily: lambda repressor-like DNA-binding domains
      Family: GalR/LacI-like bacterial regulator
Lac repressor (LacR), N-terminal domain A 2 60 D  L-Bb 
Class: All alpha proteins
  Fold: lambda repressor-like DNA-binding domains
    Superfamily: lambda repressor-like DNA-binding domains
      Family: GalR/LacI-like bacterial regulator
Lac repressor (LacR), N-terminal domain B 2 60 DE  H-Mn L-Bb 
Class: All alpha proteins
  Fold: lambda repressor-like DNA-binding domains
    Superfamily: lambda repressor-like DNA-binding domains
      Family: GalR/LacI-like bacterial regulator
Lac repressor (LacR), N-terminal domain A 2 60 D -
Class: Alpha and beta proteins (a/b)
  Fold: Periplasmic binding protein-like I
    Superfamily: Periplasmic binding protein-like I
      Family: L-arabinose binding protein-like
Lac-repressor (lacR) core (C-terminal domain) A 61 330 -
Class: Alpha and beta proteins (a/b)
  Fold: Periplasmic binding protein-like I
    Superfamily: Periplasmic binding protein-like I
      Family: L-arabinose binding protein-like
Lac-repressor (lacR) core (C-terminal domain) B 61 330 -
Class: Alpha and beta proteins (a/b)
  Fold: Periplasmic binding protein-like I
    Superfamily: Periplasmic binding protein-like I
      Family: L-arabinose binding protein-like
Lac-repressor (lacR) core (C-terminal domain) C N/A N/A -
GO terms
Protein chains: GO type: GO description:
A/B/C=1-333 C cytosol
A/B/C=1-333 F bacterial-type cis-regulatory region sequence-specific DNA binding
A/B/C=1-333 F DNA-binding transcription factor activity
A/B/C=1-333 F DNA-binding transcription repressor activity
A/B/C=1-333 F identical protein binding
A/B/C=1-333 F transcription regulatory region sequence-specific DNA binding
A/B/C=1-333 P negative regulation of transcription, DNA-templated
A/B/C=1-333 P regulation of transcription, DNA-templated
Sequences
Download file with secondary structure created by Stride  
1jwl.pdb1.pdb:   [ download sequences in FASTA format ]
D (dna): 
Click "SHOW" for view sequence
E (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
1jwl.pdb2.pdb:   [ download sequences in FASTA format ]
C (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text