General information
PDB ID 1K7A
Title ETS-1(331-440)+GGAG DUPLEX
PDB header TRANSCRIPTION/DNA
Date 2001-10-18
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.8
Kind dna
Organism MUS MUSCULUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1k7a.pdb AD BCEF 0
Biounits:
1k7a.pdb1.pdb A BC 1
1k7a.pdb2.pdb D EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ets Domain P27577_336-415 8.4e-36 1 CL0123 A 336 415 BC  H-Bb H-Mj S-Bb L-Bb 
Ets Domain P27577_336-415 8.4e-36 1 CL0123 D 336 415 EF  H-Bb H-Mj L-Bb 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: ets domain
ETS-1 transcription factor, residues 331-440 A N/A N/A BC  H-Bb H-Mj S-Bb L-Bb 
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: ets domain
ETS-1 transcription factor, residues 331-440 D N/A N/A EF  H-Bb H-Mj L-Bb 
GO terms
Protein chains: GO type: GO description:
A/D=331-440 C cytoplasm
A/D=331-440 C host cell nucleus
A/D=331-440 C nucleoplasm
A/D=331-440 C nucleus
A/D=331-440 C transcription regulator complex
A/D=331-440 F DNA binding
A/D=331-440 F DNA-binding transcription activator activity, RNA polymerase II-specific
A/D=331-440 F DNA-binding transcription factor activity
A/D=331-440 F DNA-binding transcription factor activity, RNA polymerase II-specific
A/D=331-440 F histone acetyltransferase binding
A/D=331-440 F identical protein binding
A/D=331-440 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/D=331-440 F sequence-specific DNA binding
A/D=331-440 F sequence-specific double-stranded DNA binding
A/D=331-440 P angiogenesis involved in wound healing
A/D=331-440 P cell differentiation
A/D=331-440 P cell motility
A/D=331-440 P cellular response to hydrogen peroxide
A/D=331-440 P estrous cycle
A/D=331-440 P female pregnancy
A/D=331-440 P hypothalamus development
A/D=331-440 P immune system process
A/D=331-440 P negative regulation of cell cycle
A/D=331-440 P negative regulation of inflammatory response
A/D=331-440 P pituitary gland development
A/D=331-440 P PML body organization
A/D=331-440 P positive regulation of angiogenesis
A/D=331-440 P positive regulation of blood vessel endothelial cell migration
A/D=331-440 P positive regulation of cell migration
A/D=331-440 P positive regulation of cell population proliferation
A/D=331-440 P positive regulation of cellular component movement
A/D=331-440 P positive regulation of endothelial cell migration
A/D=331-440 P positive regulation of erythrocyte differentiation
A/D=331-440 P positive regulation of gene expression
A/D=331-440 P positive regulation of inflammatory response
A/D=331-440 P positive regulation of leukocyte adhesion to vascular endothelial cell
A/D=331-440 P positive regulation of pri-miRNA transcription by RNA polymerase II
A/D=331-440 P positive regulation of transcription by RNA polymerase II
A/D=331-440 P positive regulation of transcription, DNA-templated
A/D=331-440 P regulation of angiogenesis
A/D=331-440 P regulation of apoptotic process
A/D=331-440 P regulation of extracellular matrix disassembly
A/D=331-440 P regulation of transcription by RNA polymerase II
A/D=331-440 P response to antibiotic
A/D=331-440 P response to estradiol
A/D=331-440 P response to hypoxia
A/D=331-440 P response to interleukin-1
A/D=331-440 P response to laminar fluid shear stress
A/D=331-440 P response to mechanical stimulus
A/D=331-440 P transcription by RNA polymerase II
Sequences
Download file with secondary structure created by Stride  
1k7a.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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1k7a.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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D (protein): 
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