General information
PDB ID 1KBU
Title CRE RECOMBINASE BOUND TO A LOXP HOLLIDAY JUNCTION
PDB header HYDROLASE, LIGASE/DNA
Date 2001-11-06
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.2
Kind dna
Organism ENTEROBACTERIA PHAGE P1
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1kbu.pdb AB CD 0
Biounits:
1kbu.pdb1.pdb AB CD 2
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Phage_integrase Family P06956_138-330 6.9e-36 1 CL0382 A 138 330 CD   
Phage_integrase Family P06956_138-330 1.2e-35 1 CL0382 B 138 333 CD  H-Bb H-Mj L-Bb L-Mj L-Mn 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Cre recombinase A 18 129 CD  H-Bb H-Mj L-Bb 
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Cre recombinase B 19 129 CD  H-Bb H-Mj L-Bb 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Cre recombinase A 130 341 CD  H-Bb H-Mj S-Bb L-Bb L-Mn 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Cre recombinase B 130 341 CD  H-Bb H-Mj L-Bb L-Mn 
GO terms
Protein chains: GO type: GO description:
A/B=1-343 F DNA binding
A/B=1-343 P DNA integration
A/B=1-343 P DNA recombination
Sequences
Download file with secondary structure created by Stride  
1kbu.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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