General information
PDB ID 1MFQ
Title CRYSTAL STRUCTURE ANALYSIS OF A TERNARY S-DOMAIN COMPLEX OF HUMAN SIGNAL RECOGNITION PARTICLE
PDB header SIGNALING PROTEIN/RNA
Date 2002-08-13
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.1
Kind rna
Organism HOMO SAPIENS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1mfq.pdb BC A 0
Biounits:
1mfq.pdb1.pdb BC A 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
SRP_SPB Domain P61011_326-431 5.5e-31 1 CL0123 C 326 431 A   
SRP19 Family P09132_17-115 2.2e-29 1 CL0123 B 17 115 A   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: SRP19
    Superfamily: SRP19
      Family: SRP19
SRP19 B N/A N/A A -
Class: All alpha proteins
  Fold: Signal peptide-binding domain
    Superfamily: Signal peptide-binding domain
      Family: Signal peptide-binding domain
SRP54M C N/A N/A A -
GO terms
Protein chains: GO type: GO description:
B=14-120 C cytosol
B=14-120 C nucleolus
B=14-120 C signal recognition particle
B=14-120 C signal recognition particle, endoplasmic reticulum targeting
B=14-120 F 7S RNA binding
B=14-120 F RNA binding
B=14-120 P cotranslational protein targeting to membrane
B=14-120 P response to drug
B=14-120 P SRP-dependent cotranslational protein targeting to membrane
B=14-120 P SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition
C=323-441 C cytoplasm
C=323-441 C cytosol
C=323-441 C endoplasmic reticulum
C=323-441 C nuclear speck
C=323-441 C nucleus
C=323-441 C signal recognition particle, endoplasmic reticulum targeting
C=323-441 F 7S RNA binding
C=323-441 F drug binding
C=323-441 F endoplasmic reticulum signal peptide binding
C=323-441 F GDP binding
C=323-441 F GTP binding
C=323-441 F GTPase activity
C=323-441 F ribonucleoprotein complex binding
C=323-441 F RNA binding
C=323-441 P exocrine pancreas development
C=323-441 P granulocyte differentiation
C=323-441 P neutrophil chemotaxis
C=323-441 P protein targeting to ER
C=323-441 P response to drug
C=323-441 P SRP-dependent cotranslational protein targeting to membrane
C=323-441 P SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition
C=323-441 P SRP-dependent cotranslational protein targeting to membrane, translocation
Sequences
Download file with secondary structure created by Stride  
1mfq.pdb1.pdb:   [ download sequences in FASTA format ]
B (protein): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
A (rna): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text