General information
PDB ID 1TF6
Title CO-CRYSTAL STRUCTURE OF XENOPUS TFIIIA ZINC FINGER DOMAIN BOUND TO THE 5S RIBOSOMAL RNA GENE INTERNAL CONTROL REGION
PDB header TRANSCRIPTION/DNA
Date 1998-03-02
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.1
Kind dna
Organism XENOPUS LAEVIS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1tf6.pdb AD BCEF 0
Biounits:
1tf6.pdb1.pdb A BC 1
1tf6.pdb2.pdb D EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-H2C2_2 Domain P03001_73-100 0.00023 0 CL0361 A 59 86 BC  H-Bb H-Mj L-Bb L-Mj 
zf-H2C2_2 Domain P03001_44-70 0.00083 0 CL0361 A 29 56 B   
zf-H2C2_2 Domain P03001_73-100 0.00023 0 CL0361 D 59 86 EF  H-Bb H-Mj L-Bb L-Mj 
zf-H2C2_2 Domain P03001_44-70 0.00085 0 CL0361 D 29 56 E  H-Bb 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Transcription factor IIIA, TFIIIA A 10 40 BC  H-Bb H-Mj L-Bb L-Mj 
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Transcription factor IIIA, TFIIIA A 41 70 BC  H-Bb H-Mj 
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Transcription factor IIIA, TFIIIA A 71 100 BC  H-Bb H-Mj L-Bb L-Mj 
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Transcription factor IIIA, TFIIIA A 101 131 -
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Transcription factor IIIA, TFIIIA A 132 160 BC  H-Bb H-Mj L-Bb L-Mj 
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Transcription factor IIIA, TFIIIA A 161 188 -
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Transcription factor IIIA, TFIIIA D 7 40 EF  H-Bb H-Mj L-Bb L-Mj 
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Transcription factor IIIA, TFIIIA D 41 70 EF  H-Bb H-Mj 
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Transcription factor IIIA, TFIIIA D 71 100 EF  H-Bb H-Mj L-Bb L-Mj 
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Transcription factor IIIA, TFIIIA D 101 131 -
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Transcription factor IIIA, TFIIIA D 132 160 EF  H-Bb H-Mj L-Bb L-Mj 
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Transcription factor IIIA, TFIIIA D 161 188 -
GO terms
Protein chains: GO type: GO description:
A/D=23-212 C nucleus
A/D=23-212 F DNA binding
A/D=23-212 F metal ion binding
A/D=23-212 F RNA binding
A/D=23-212 P ribosomal large subunit biogenesis
Sequences
Download file with secondary structure created by Stride  
1tf6.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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1tf6.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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D (protein): 
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