General information
PDB ID 1XS9
Title A MODEL OF THE TERNARY COMPLEX FORMED BETWEEN MARA, THE ALPHA-CTD OF RNA POLYMERASE AND DNA
PDB header TRANSCRIPTION/DNA
Date 2004-10-18
Experimental method SOLUTION NMR
Resolution (A) N/A
Kind dna
Organism ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1xs9.pdb AD BC 0
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
HTH_18 Domain P0ACH5_31-110 1.5e-17 1 CL0123 A 33 112 BC  H-Bb H-Mj L-Bb 
RNA_pol_A_CTD Domain P0A7Z4_250-309 1.4e-24 1 CL0198 D 250 309   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Low resolution protein structures
  Fold: Computational models partly based on experimental data
    Superfamily: Computational models partly based on experimental data
      Family: Computational models partly based on experimental data
Ternary complex formed between MarA, the alpha-CTD of RNA polymerase and DNA A N/A N/A BC -
GO terms
Protein chains: GO type: GO description:
A=1-127 F DNA binding
A=1-127 F DNA-binding transcription factor activity
A=1-127 F sequence-specific DNA binding
A=1-127 P negative regulation of transcription, DNA-templated
A=1-127 P positive regulation of transcription, DNA-templated
A=1-127 P response to antibiotic
D=249-329 C cytoplasm
D=249-329 C cytosol
D=249-329 C membrane
D=249-329 F DNA binding
D=249-329 F DNA-directed 5'-3' RNA polymerase activity
D=249-329 F protein dimerization activity
D=249-329 P transcription, DNA-templated
Sequences
Download file with secondary structure created by Stride  
pdb1xs9.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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D (protein): 
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