General information
PDB ID 1ZME
Title CRYSTAL STRUCTURE OF PUT3/DNA COMPLEX
PDB header TRANSCRIPTION/DNA
Date 1997-08-06
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.5
Kind dna
Organism SACCHAROMYCES CEREVISIAE
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
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Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1zme.pdb CD AB 0
Biounits:
1zme.pdb1.pdb CD AB 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Zn_clus Domain P25502_32-69 5.5e-12 1 No_clan C 32 69 AB  H-Bb H-Mj S-Bb L-Bb L-Mj 
Zn_clus Domain P25502_32-69 5.5e-12 1 No_clan D 32 69 AB  H-Bb H-Mj S-Bb S-Mn L-Bb L-Mj L-Mn 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Small proteins
  Fold: Zn2/Cys6 DNA-binding domain
    Superfamily: Zn2/Cys6 DNA-binding domain
      Family: Zn2/Cys6 DNA-binding domain
PUT3 C 31 66 AB  H-Bb H-Mj L-Bb L-Mj 
Class: Small proteins
  Fold: Zn2/Cys6 DNA-binding domain
    Superfamily: Zn2/Cys6 DNA-binding domain
      Family: Zn2/Cys6 DNA-binding domain
PUT3 D 31 66 AB  H-Bb L-Bb L-Mj 
Class: Coiled coil proteins
  Fold: Parallel coiled-coil
    Superfamily: Leucine zipper domain
      Family: Leucine zipper domain
PUT3 C 67 100 B  H-Bb 
Class: Coiled coil proteins
  Fold: Parallel coiled-coil
    Superfamily: Leucine zipper domain
      Family: Leucine zipper domain
PUT3 D 67 100 AB  S-Bb S-Mn 
GO terms
Protein chains: GO type: GO description:
C/D=31-100 C host cell nucleus
C/D=31-100 C nucleus
C/D=31-100 F DNA-binding transcription activator activity, RNA polymerase II-specific
C/D=31-100 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
C/D=31-100 F sequence-specific DNA binding
C/D=31-100 F zinc ion binding
C/D=31-100 P positive regulation of proline catabolic process to glutamate
C/D=31-100 P positive regulation of transcription by RNA polymerase II
C/D=31-100 P proline metabolic process
C/D=31-100 P transcription, DNA-templated
C/D=31-100 P transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
Sequences
Download file with secondary structure created by Stride  
1zme.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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C (protein): 
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D (protein): 
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