General information
PDB ID 2C6Y
Title CRYSTAL STRUCTURE OF INTERLEUKIN ENHANCER-BINDING FACTOR 1 BOUND TO DNA
PDB header TRANSCRIPTION REGULATION
Date 2005-11-15
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.4
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2c6y.pdb AB CD 0
Biounits:
2c6y.pdb1.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Forkhead Domain Q01167_257-343 2.7e-39 1 CL0123 A 2 88 CD  H-Bb H-Mj S-Bb L-Bb L-Mn 
Forkhead Domain Q01167_257-343 2.4e-39 1 CL0123 B 2 88 DC  H-Bb H-Mj S-Bb L-Bb 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: Forkhead DNA-binding domain
Interleukin enhancer binding factor A 1 98 CD -
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: Forkhead DNA-binding domain
Interleukin enhancer binding factor B 1 96 DC -
GO terms
Protein chains: GO type: GO description:
A/B=256-353 C intracellular membrane-bounded organelle
A/B=256-353 C mitochondrion
A/B=256-353 C nuclear chromatin
A/B=256-353 C nucleoplasm
A/B=256-353 C nucleus
A/B=256-353 F DNA-binding transcription activator activity, RNA polymerase II-specific
A/B=256-353 F DNA-binding transcription factor activity
A/B=256-353 F DNA-binding transcription factor activity, RNA polymerase II-specific
A/B=256-353 F DNA-binding transcription repressor activity, RNA polymerase II-specific
A/B=256-353 F magnesium ion binding
A/B=256-353 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B=256-353 F sequence-specific DNA binding
A/B=256-353 F transcription regulatory region sequence-specific DNA binding
A/B=256-353 P canonical glycolysis
A/B=256-353 P cellular glucose homeostasis
A/B=256-353 P negative regulation of autophagy
A/B=256-353 P negative regulation of transcription, DNA-templated
A/B=256-353 P positive regulation of transcription by RNA polymerase II
A/B=256-353 P positive regulation of transcription, DNA-templated
A/B=256-353 P protein deubiquitination
A/B=256-353 P regulation of glucose metabolic process
A/B=256-353 P regulation of transcription by RNA polymerase II
A/B=256-353 P regulation of transcription, DNA-templated
A/B=256-353 P response to starvation
Sequences
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2c6y.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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