General information
PDB ID 2HOT
Title PHAGE SELECTED HOMEODOMAIN BOUND TO MODIFIED DNA
PDB header TRANSCRIPTION/DNA
Date 2006-07-16
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.19
Kind dna
Organism DROSOPHILA MELANOGASTER
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2hot.pdb AB CD 0
Biounits:
2hot.pdb1.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Homeodomain Domain P02836_456-511 3.3e-20 1 CL0123 A 5 58 CD  H-Bb H-Mj L-Bb L-Mn 
Homeodomain Domain P02836_456-511 2.3e-21 1 CL0123 B 2 58 CD  H-Bb H-Mj L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=453-513 C nucleus
A/B=453-513 C RSC-type complex
A/B=453-513 F DNA-binding transcription repressor activity, RNA polymerase II-specific
A/B=453-513 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B=453-513 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
A/B=453-513 F sequence-specific DNA binding
A/B=453-513 P analia development
A/B=453-513 P anterior head segmentation
A/B=453-513 P anterior/posterior lineage restriction, imaginal disc
A/B=453-513 P axon guidance
A/B=453-513 P compartment pattern specification
A/B=453-513 P genital disc anterior/posterior pattern formation
A/B=453-513 P genital disc development
A/B=453-513 P gonad development
A/B=453-513 P imaginal disc-derived wing vein specification
A/B=453-513 P negative regulation of gene expression
A/B=453-513 P negative regulation of neuron apoptotic process
A/B=453-513 P negative regulation of transcription by RNA polymerase II
A/B=453-513 P neuroblast fate determination
A/B=453-513 P neuron differentiation
A/B=453-513 P positive regulation of transcription by RNA polymerase II
A/B=453-513 P posterior compartment specification
A/B=453-513 P posterior head segmentation
A/B=453-513 P regulation of gene expression
A/B=453-513 P regulation of transcription by RNA polymerase II
A/B=453-513 P segment polarity determination
A/B=453-513 P spiracle morphogenesis, open tracheal system
A/B=453-513 P trunk segmentation
A/B=453-513 P ventral midline development
A/B=453-513 P wing disc anterior/posterior pattern formation
A/B=453-513 P wing disc morphogenesis
Sequences
Download file with secondary structure created by Stride  
2hot.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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