General information
PDB ID 2P5L
Title CRYSTAL STRUCTURE OF A DIMER OF N-TERMINAL DOMAINS OF AHRC IN COMPLEX WITH AN 18BP DNA OPERATOR SITE
PDB header TRANSCRIPTION REPRESSOR
Date 2007-03-15
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.85
Kind dna
Organism BACILLUS SUBTILIS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2p5l.pdb CDGH ABEF 0
Biounits:
2p5l.pdb1.pdb CD AB 1
2p5l.pdb2.pdb GH EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Arg_repressor Domain P17893_2-64 1.4e-29 1 CL0123 C 2 64 AB  H-Bb H-Mj S-Bb L-Bb 
Arg_repressor Domain P17893_2-64 2.8e-30 1 CL0123 D 1 64 AB  H-Bb H-Mj S-Bb L-Bb 
Arg_repressor Domain P17893_2-64 1.4e-29 1 CL0123 G 2 64 EF  H-Bb H-Mj S-Bb L-Bb 
Arg_repressor Domain P17893_2-64 2.8e-30 1 CL0123 H 1 64 EF  H-Bb H-Mj S-Bb L-Bb 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: Arginine repressor (ArgR), N-terminal DNA-binding domain
Arginine repressor (ArgR), N-terminal DNA-binding domain C 2 64 AB -
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: Arginine repressor (ArgR), N-terminal DNA-binding domain
Arginine repressor (ArgR), N-terminal DNA-binding domain D 2 64 AB -
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: Arginine repressor (ArgR), N-terminal DNA-binding domain
Arginine repressor (ArgR), N-terminal DNA-binding domain G 2 64 EF -
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: Arginine repressor (ArgR), N-terminal DNA-binding domain
Arginine repressor (ArgR), N-terminal DNA-binding domain H 2 64 EF -
GO terms
Protein chains: GO type: GO description:
C/D/G/H=1-64 C cytoplasm
C/D/G/H=1-64 F arginine binding
C/D/G/H=1-64 F DNA binding
C/D/G/H=1-64 F DNA-binding transcription factor activity
C/D/G/H=1-64 P arginine biosynthetic process
C/D/G/H=1-64 P arginine catabolic process to ornithine
C/D/G/H=1-64 P protein complex oligomerization
Sequences
Download file with secondary structure created by Stride  
2p5l.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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C (protein): 
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D (protein): 
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2p5l.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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G (protein): 
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H (protein): 
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