General information
PDB ID 2V3C
Title CRYSTAL STRUCTURE OF THE SRP54-SRP19-7S.S SRP RNA COMPLEX OF M. JANNASCHII
PDB header SIGNALING PROTEIN
Date 2007-06-15
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.5
Kind rna
Organism METHANOCALDOCOCCUS JANNASCHII
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2v3c.pdb ABCD MN 0
Biounits:
2v3c.pdb1.pdb AC M 1
2v3c.pdb2.pdb BD N 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
SRP54 Domain Q57565_100-295 3.8e-78 1 CL0023 C 100 295   
SRP_SPB Domain Q57565_325-424 3.1e-18 1 CL0123 C 284 424 M   
SRP54_N Domain Q57565_5-82 7.5e-17 1 No_clan C 5 82   
SRP54 Domain Q57565_100-295 3.8e-78 1 CL0023 D 100 295   
SRP_SPB Domain Q57565_325-424 4e-20 1 CL0123 D 283 424 N   
SRP54_N Domain Q57565_5-82 7.4e-17 1 No_clan D 5 82   
SRP19 Family Q58440_2-86 5.6e-23 1 CL0123 A 2 86 M   
SRP19 Family Q58440_2-86 5.6e-23 1 CL0123 B 2 86 N   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: SRP19
    Superfamily: SRP19
      Family: SRP19
SRP19 A 1 87 M -
Class: Alpha and beta proteins (a+b)
  Fold: SRP19
    Superfamily: SRP19
      Family: SRP19
SRP19 B 1 87 N -
GO terms
Protein chains: GO type: GO description:
A/B=1-87 C signal recognition particle
A/B=1-87 F 7S RNA binding
A/B=1-87 P SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition
C/D=3-427 C signal recognition particle
C/D=3-427 F 7S RNA binding
C/D=3-427 F GTP binding
C/D=3-427 F GTPase activity
C/D=3-427 P SRP-dependent cotranslational protein targeting to membrane
Sequences
Download file with secondary structure created by Stride  
2v3c.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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C (protein): 
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M (rna): 
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2v3c.pdb2.pdb:   [ download sequences in FASTA format ]
B (protein): 
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D (protein): 
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N (rna): 
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