General information
PDB ID 2W7P
Title STRUCTURE AND ACTIVITY OF BYPASS SYNTHESIS BY HUMAN DNA POLYMERASE KAPPA OPPOSITE THE 7,8-DIHYDRO-8- OXODEOXYGUANOSINE ADDUCT
PDB header DNA-BINDING PROTEIN
Date 2008-12-23
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.71
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2w7p.pdb AB EFPT 0
Biounits:
2w7p.pdb1.pdb A PT 1
2w7p.pdb2.pdb B EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
IMS_C Domain Q9UBT6_413-517 1.1e-14 1 No_clan A 413 520 PT  S-Bb L-Bb 
IMS_C Domain Q9UBT6_413-517 1.1e-14 1 No_clan B 413 520 EF  S-Bb S-Mj L-Bb 
IMS Family Q9UBT6_106-325 1.4e-45 1 No_clan A 106 325 PT  L-Bb 
IMS Family Q9UBT6_106-325 1.4e-45 1 No_clan B 106 325 EF  H-Bb L-Bb 
IMS_HHH Motif Q9UBT6_339-370 5.1e-07 1 CL0198 A 339 370 P  H-Bb L-Bb 
IMS_HHH Motif Q9UBT6_339-370 5.1e-07 1 CL0198 B 339 370 E  H-Bb L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=19-526 C nuclear body
A/B=19-526 C nucleoplasm
A/B=19-526 C nucleus
A/B=19-526 F damaged DNA binding
A/B=19-526 F DNA-directed DNA polymerase activity
A/B=19-526 F metal ion binding
A/B=19-526 P cellular response to DNA damage stimulus
A/B=19-526 P cellular response to UV
A/B=19-526 P DNA repair
A/B=19-526 P DNA replication
A/B=19-526 P error-prone translesion synthesis
A/B=19-526 P nucleotide-excision repair, DNA gap filling
A/B=19-526 P nucleotide-excision repair, DNA incision
A/B=19-526 P nucleotide-excision repair, DNA incision, 5'-to lesion
A/B=19-526 P transcription-coupled nucleotide-excision repair
A/B=19-526 P translesion synthesis
Sequences
Download file with secondary structure created by Stride  
2w7p.pdb1.pdb:   [ download sequences in FASTA format ]
P (dna): 
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T (dna): 
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A (protein): 
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2w7p.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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B (protein): 
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