General information
PDB ID 2XSD
Title CRYSTAL STRUCTURE OF THE DIMERIC OCT-6 (POU3F1) POU DOMAIN BOUND TO PALINDROMIC MORE DNA
PDB header TRANSCRIPTION/DNA
Date 2010-09-28
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.05
Kind dna
Organism MUS MUSCULUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2xsd.pdb C AB 0
Biounits:
2xsd.pdb1.pdb C AB 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Pou Domain P21952_248-319 3.7e-38 1 CL0123 C 248 319 AB  H-Bb H-Mj L-Bb L-Mj 
Homeodomain Domain P21952_343-394 2.9e-16 1 CL0123 C 344 394 AB  H-Bb H-Mj L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
C=240-402 C nucleoplasm
C=240-402 C nucleus
C=240-402 C transcription regulator complex
C=240-402 F DNA binding
C=240-402 F DNA-binding transcription activator activity, RNA polymerase II-specific
C=240-402 F DNA-binding transcription factor activity, RNA polymerase II-specific
C=240-402 F sequence-specific DNA binding
C=240-402 F sequence-specific double-stranded DNA binding
C=240-402 P cell differentiation
C=240-402 P epidermis development
C=240-402 P forebrain development
C=240-402 P keratinocyte differentiation
C=240-402 P myelination
C=240-402 P myelination in peripheral nervous system
C=240-402 P positive regulation of gene expression
C=240-402 P positive regulation of transcription by RNA polymerase II
C=240-402 P positive regulation of transcription, DNA-templated
C=240-402 P Schwann cell development
Sequences
Download file with secondary structure created by Stride  
2xsd.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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C (protein): 
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