General information
PDB ID 3G8X
Title GR DNA BINDING DOMAIN:GILZ 16BP COMPLEX-65
PDB header TRANSCRIPTION/DNA
Date 2009-02-12
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.05
Kind dna
Organism RATTUS NORVEGICUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3g8x.pdb AB DC 0
Biounits:
3g8x.pdb1.pdb AB DC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-C4 Domain P06536_438-507 7e-30 1 CL0167 A 438 507 CD  H-Bb H-Mj L-Bb 
zf-C4 Domain P06536_438-507 1.1e-29 1 CL0167 B 439 507 CD  H-Bb H-Mj L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=440-525 C cytoplasm
A/B=440-525 C cytosol
A/B=440-525 C dendritic spine
A/B=440-525 C membrane
A/B=440-525 C microtubule organizing center
A/B=440-525 C mitochondrion
A/B=440-525 C neuron projection
A/B=440-525 C nuclear speck
A/B=440-525 C nucleus
A/B=440-525 C postsynaptic density
A/B=440-525 C protein-containing complex
A/B=440-525 C spindle
A/B=440-525 F chromatin binding
A/B=440-525 F core promoter sequence-specific DNA binding
A/B=440-525 F DNA binding
A/B=440-525 F DNA-binding transcription activator activity, RNA polymerase II-specific
A/B=440-525 F DNA-binding transcription factor activity
A/B=440-525 F DNA-binding transcription repressor activity, RNA polymerase II-specific
A/B=440-525 F double-stranded DNA binding
A/B=440-525 F glucocorticoid receptor activity
A/B=440-525 F heat shock protein binding
A/B=440-525 F hormone binding
A/B=440-525 F Hsp70 protein binding
A/B=440-525 F Hsp90 protein binding
A/B=440-525 F identical protein binding
A/B=440-525 F nuclear receptor activity
A/B=440-525 F protein kinase binding
A/B=440-525 F protein-containing complex binding
A/B=440-525 F receptor tyrosine kinase binding
A/B=440-525 F repressing transcription factor binding
A/B=440-525 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B=440-525 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
A/B=440-525 F sequence-specific DNA binding
A/B=440-525 F steroid binding
A/B=440-525 F steroid hormone binding
A/B=440-525 F transcription coactivator activity
A/B=440-525 F transcription factor binding
A/B=440-525 F zinc ion binding
A/B=440-525 P adrenal gland development
A/B=440-525 P aging
A/B=440-525 P androgen metabolic process
A/B=440-525 P brain development
A/B=440-525 P cellular response to dexamethasone stimulus
A/B=440-525 P cellular response to glucocorticoid stimulus
A/B=440-525 P cellular response to magnesium ion
A/B=440-525 P cellular response to steroid hormone stimulus
A/B=440-525 P cellular response to transforming growth factor beta stimulus
A/B=440-525 P chromatin remodeling
A/B=440-525 P chromatin-mediated maintenance of transcription
A/B=440-525 P circadian rhythm
A/B=440-525 P female pregnancy
A/B=440-525 P glucocorticoid metabolic process
A/B=440-525 P glucocorticoid receptor signaling pathway
A/B=440-525 P lung development
A/B=440-525 P mammary gland duct morphogenesis
A/B=440-525 P maternal behavior
A/B=440-525 P muscle atrophy
A/B=440-525 P negative regulation of apoptotic process
A/B=440-525 P negative regulation of glucocorticoid mediated signaling pathway
A/B=440-525 P negative regulation of synaptic plasticity
A/B=440-525 P negative regulation of transcription by RNA polymerase II
A/B=440-525 P negative regulation of transcription, DNA-templated
A/B=440-525 P negative regulation of vascular permeability
A/B=440-525 P positive regulation of cell growth involved in cardiac muscle cell development
A/B=440-525 P positive regulation of dendritic spine development
A/B=440-525 P positive regulation of glucocorticoid receptor signaling pathway
A/B=440-525 P positive regulation of glutamate secretion
A/B=440-525 P positive regulation of neuron apoptotic process
A/B=440-525 P positive regulation of pri-miRNA transcription by RNA polymerase II
A/B=440-525 P positive regulation of transcription by RNA polymerase II
A/B=440-525 P protein-containing complex assembly
A/B=440-525 P regulation of cell population proliferation
A/B=440-525 P regulation of glucocorticoid biosynthetic process
A/B=440-525 P regulation of gluconeogenesis
A/B=440-525 P regulation of glucose metabolic process
A/B=440-525 P regulation of transcription, DNA-templated
A/B=440-525 P response to activity
A/B=440-525 P response to arsenic-containing substance
A/B=440-525 P response to calcium ion
A/B=440-525 P response to corticosterone
A/B=440-525 P response to dexamethasone
A/B=440-525 P response to electrical stimulus
A/B=440-525 P response to inactivity
A/B=440-525 P response to insulin
A/B=440-525 P response to mercury ion
A/B=440-525 P response to radiation
A/B=440-525 P transcription, DNA-templated
Sequences
Download file with secondary structure created by Stride  
3g8x.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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