General information
PDB ID 3IY8
Title LEISHMANIA TARENTOLAE MITONCHONDRIAL RIBOSOME SMALL SUBUNIT
PDB header RIBOSOME
Date 2009-04-16
Experimental method ELECTRON MICROSCOPY
Resolution (A) 14.1
Kind rna
Organism LEISHMANIA TARENTOLAE, ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3iy8.pdb EFHIKLOPQR A 0
Biounits:
3iy8.pdb1.pdb EFHIKLOPQR A 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_S5_C Domain 3.7e-30 1 CL0329 E 78 148
Ribosomal_S5 Domain 1e-29 1 CL0196 E 2 66
Ribosomal_S6 Domain P02358_3-91 1.7e-28 1 No_clan F 3 91   
Ribosomal_S8 Domain 3.8e-48 1 No_clan H 4 129
Ribosomal_S15 Domain 2.7e-37 1 CL0600 O 7 87
Ribosomal_S17 Domain 2.1e-34 1 CL0021 Q 7 74
Ribosomal_S9 Family 1.1e-46 1 CL0329 I 7 127
Ribosomal_S11 Family 1.5e-54 1 CL0267 K 7 116
Ribosom_S12_S23 Family 5.6e-43 1 CL0021 L 11 122
Ribosomal_S16 Family 1.1e-24 1 No_clan P 8 68
Ribosomal_S18 Family 1.4e-24 1 CL0123 R 1 49
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
F=2-100 C cytosol
F=2-100 C cytosolic small ribosomal subunit
F=2-100 F mRNA 5'-UTR binding
F=2-100 F small ribosomal subunit rRNA binding
F=2-100 F structural constituent of ribosome
F=2-100 P translation
Sequences
Download file with secondary structure created by Stride  
3iy8.pdb1.pdb:   [ download sequences in FASTA format ]
E (protein): 
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F (protein): 
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H (protein): 
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I (protein): 
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K (protein): 
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L (protein): 
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O (protein): 
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P (protein): 
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Q (protein): 
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R (protein): 
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A (rna): 
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