General information
PDB ID 3KWQ
Title STRUCTURAL CHARACTERIZATION OF H3K56Q NUCLEOSOMES AND NUCLEOSOMAL ARRAYS
PDB header STRUCTURAL PROTEIN/DNA
Date 2009-12-01
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.5
Kind dna
Organism XENOPUS LAEVIS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3kwq.pdb ABCDEFGH IJ 0
Biounits:
3kwq.pdb1.pdb ABCDEFGH IJ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Histone Domain P84233_37-132 2.3e-45 1 CL0012 A 38 131 IJ  H-Bb H-Mj S-Bb L-Bb L-Mn 
CENP-T_C Domain P62799_26-99 4.4e-08 1 CL0012 B 26 98 IJ  H-Bb S-Bb L-Bb 
Histone Domain P06897_13-91 9.4e-16 1 CL0012 C 14 90 IJ  H-Bb S-Bb L-Bb 
Histone Domain P02281_33-102 3e-21 1 CL0012 D 30 98 IJ  H-Bb L-Bb 
Histone Domain P84233_37-132 2.3e-45 1 CL0012 E 38 131 IJ  H-Bb H-Mj S-Bb L-Bb L-Mn 
CENP-T_C Domain P62799_18-99 4.9e-08 1 CL0012 F 25 98 IJ  H-Bb H-Mj S-Bb L-Bb 
Histone Domain P06897_13-91 9.2e-16 1 CL0012 G 14 90 IJ  H-Bb S-Bb L-Bb 
Histone Domain P02281_33-102 3e-21 1 CL0012 H 30 98 IJ  H-Bb S-Bb L-Bb 
Histone_H2A_C Family P06897_92-120 8.1e-19 1 No_clan C 91 920   
Histone_H2A_C Family P06897_92-120 4e-18 1 No_clan G 91 119   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/E=39-136 C nucleoplasm
A/E=39-136 C nucleosome
A/E=39-136 F DNA binding
A/E=39-136 F protein heterodimerization activity
B/F=21-103 C host cell nucleus
B/F=21-103 C nucleosome
B/F=21-103 C nucleus
B/F=21-103 F DNA binding
B/F=21-103 F protein heterodimerization activity
B/F=21-103 P DNA-templated transcription, initiation
C/G=15-121 C nucleosome
C/G=15-121 C nucleus
C/G=15-121 F DNA binding
C/G=15-121 F protein heterodimerization activity
D/H=34-126 C nucleosome
D/H=34-126 C nucleus
D/H=34-126 F DNA binding
D/H=34-126 F protein heterodimerization activity
Sequences
Download file with secondary structure created by Stride  
3kwq.pdb1.pdb:   [ download sequences in FASTA format ]
I (dna): 
Click "SHOW" for view sequence
J (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
E (protein): 
Click "SHOW" for view sequence
F (protein): 
Click "SHOW" for view sequence
G (protein): 
Click "SHOW" for view sequence
H (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text