General information
PDB ID 3NH2
Title CRYSTAL STRUCTURE OF RNASE T IN COMPLEX WITH A STEM DNA WITH A 3' OVERHANG
PDB header HYDROLASE/DNA
Date 2010-06-14
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.3
Kind dna
Organism ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3nh2.pdb ABEF CDGH 0
Biounits:
3nh2.pdb1.pdb ABEF CDGH 1
3nh2.pdb2.pdb AB 1
3nh2.pdb3.pdb C 1
3nh2.pdb4.pdb D 1
3nh2.pdb5.pdb EF 1
3nh2.pdb6.pdb G 1
3nh2.pdb7.pdb H 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RNase_T Family P30014_20-194 6.3e-33 1 CL0219 A 20 194   
RNase_T Family P30014_20-194 6.3e-33 1 CL0219 A 20 194   
RNase_T Family P30014_20-194 6.3e-33 1 CL0219 A 20 194 CD   
RNase_T Family P30014_20-194 6.3e-33 1 CL0219 A 20 194 CD   
RNase_T Family P30014_20-194 3.2e-37 1 CL0219 B 20 194   
RNase_T Family P30014_20-194 3.2e-37 1 CL0219 B 20 194   
RNase_T Family P30014_20-194 3.2e-37 1 CL0219 B 20 194 DGC   
RNase_T Family P30014_20-194 3.2e-37 1 CL0219 B 20 194 DGC   
RNase_T Family P30014_20-194 3.2e-37 1 CL0219 E 20 194   
RNase_T Family P30014_20-194 3.2e-37 1 CL0219 E 20 194   
RNase_T Family P30014_20-194 3.2e-37 1 CL0219 E 20 194 GHC   
RNase_T Family P30014_20-194 3.2e-37 1 CL0219 E 20 194 GHC   
RNase_T Family P30014_20-194 6.3e-33 1 CL0219 F 20 194   
RNase_T Family P30014_20-194 6.3e-33 1 CL0219 F 20 194   
RNase_T Family P30014_20-194 6.3e-33 1 CL0219 F 20 194 CHG   
RNase_T Family P30014_20-194 6.3e-33 1 CL0219 F 20 194 CHG   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/E/F=1-215 C cytosol
A/B/E/F=1-215 C DNA polymerase III, core complex
A/B/E/F=1-215 F 3'-5' exonuclease activity
A/B/E/F=1-215 F exoribonuclease activity, producing 5'-phosphomonoesters
A/B/E/F=1-215 F identical protein binding
A/B/E/F=1-215 F magnesium ion binding
A/B/E/F=1-215 F nucleic acid binding
A/B/E/F=1-215 P DNA replication proofreading
A/B/E/F=1-215 P tRNA 3'-end processing
Sequences
Download file with secondary structure created by Stride  
3nh2.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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G (dna): 
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H (dna): 
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A (protein): 
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B (protein): 
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E (protein): 
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F (protein): 
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3nh2.pdb2.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (protein): 
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3nh2.pdb3.pdb:   [ download sequences in FASTA format ]
C (dna): 
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3nh2.pdb4.pdb:   [ download sequences in FASTA format ]
D (dna): 
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3nh2.pdb5.pdb:   [ download sequences in FASTA format ]
E (protein): 
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F (protein): 
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3nh2.pdb6.pdb:   [ download sequences in FASTA format ]
G (dna): 
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3nh2.pdb7.pdb:   [ download sequences in FASTA format ]
H (dna): 
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