General information
PDB ID 3V9X
Title CRYSTAL STRUCTURE OF RNASE T IN COMPLEX WITH A PREFERRED SSDNA (AAA) WITH TWO MG IN THE ACTIVE SITE
PDB header HYDROLASE/DNA
Date 2011-12-28
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.9
Kind dna
Organism ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3v9x.pdb ABCD EFGH 0
Biounits:
3v9x.pdb1.pdb AB EF 1
3v9x.pdb2.pdb CD GH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RNase_T Family P30014_20-194 3.4e-37 1 CL0219 A 20 194 EF   
RNase_T Family P30014_20-194 3.5e-37 1 CL0219 B 20 194 EF   
RNase_T Family P30014_20-194 3e-37 1 CL0219 C 20 194 GH   
RNase_T Family P30014_20-194 3e-37 1 CL0219 D 20 194 GH   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/C/D=1-215 C cytosol
A/B/C/D=1-215 C DNA polymerase III, core complex
A/B/C/D=1-215 F 3'-5' exonuclease activity
A/B/C/D=1-215 F exoribonuclease activity, producing 5'-phosphomonoesters
A/B/C/D=1-215 F identical protein binding
A/B/C/D=1-215 F magnesium ion binding
A/B/C/D=1-215 F nucleic acid binding
A/B/C/D=1-215 P DNA replication proofreading
A/B/C/D=1-215 P tRNA 3'-end processing
Sequences
Download file with secondary structure created by Stride  
3v9x.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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A (protein): 
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B (protein): 
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3v9x.pdb2.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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C (protein): 
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D (protein): 
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