General information
PDB ID 4ATK
Title MITF:E-BOX COMPLEX
PDB header DNA BINDING PROTEIN/DNA
Date 2012-05-08
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.95
Kind dna
Organism MUS MUSCULUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4atk.pdb AB CD 0
Biounits:
4atk.pdb1.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
HLH Domain Q08874_312-365 1.2e-17 1 No_clan A 207 258 CD  H-Bb H-Mj L-Bb 
HLH Domain Q08874_312-365 8.6e-19 1 No_clan B 205 258 CD  H-Bb H-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=287-403 C cytoplasm
A/B=287-403 C nucleus
A/B=287-403 C protein-containing complex
A/B=287-403 F chromatin binding
A/B=287-403 F DNA binding
A/B=287-403 F DNA-binding transcription activator activity, RNA polymerase II-specific
A/B=287-403 F DNA-binding transcription factor activity
A/B=287-403 F DNA-binding transcription factor activity, RNA polymerase II-specific
A/B=287-403 F E-box binding
A/B=287-403 F protein dimerization activity
A/B=287-403 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B=287-403 F sequence-specific DNA binding
A/B=287-403 P bone remodeling
A/B=287-403 P camera-type eye development
A/B=287-403 P canonical Wnt signaling pathway involved in negative regulation of apoptotic process
A/B=287-403 P cell differentiation
A/B=287-403 P cell fate commitment
A/B=287-403 P melanocyte differentiation
A/B=287-403 P negative regulation of apoptotic process
A/B=287-403 P negative regulation of cell migration
A/B=287-403 P negative regulation of transcription by RNA polymerase II
A/B=287-403 P osteoclast differentiation
A/B=287-403 P pigmentation
A/B=287-403 P positive regulation of DNA-templated transcription, initiation
A/B=287-403 P positive regulation of gene expression
A/B=287-403 P positive regulation of transcription by RNA polymerase II
A/B=287-403 P positive regulation of transcription, DNA-templated
A/B=287-403 P protein-containing complex assembly
A/B=287-403 P regulation of cell population proliferation
A/B=287-403 P regulation of gene expression
A/B=287-403 P regulation of osteoclast differentiation
A/B=287-403 P regulation of RNA biosynthetic process
A/B=287-403 P regulation of transcription by RNA polymerase II
A/B=287-403 P regulation of transcription, DNA-templated
A/B=287-403 P transcription, DNA-templated
A/B=287-403 P Wnt signaling pathway
Sequences
Download file with secondary structure created by Stride  
4atk.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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