General information
PDB ID 4UUV
Title STRUCTURE OF THE DNA BINDING ETS DOMAIN OF HUMAN ETV4 IN COMPLEX WITH DNA
PDB header TRANSCRIPTION
Date 2014-07-31
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.8
Kind dna
Organism HOMO SAPIENS, SYNTHETIC CONSTRUCT
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4uuv.pdb ADGJMPSV BCEFHIKLNOQRTUWX 0
Biounits:
4uuv.pdb1.pdb JV KLWX 1
4uuv.pdb2.pdb DG EFHI 1
4uuv.pdb3.pdb MS NOTU 1
4uuv.pdb4.pdb AP BCQR 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ets Domain P43268_342-421 7.3e-36 1 CL0123 A 342 421 BC  H-Bb H-Mj L-Bb 
Ets Domain P43268_342-421 7e-36 1 CL0123 D 342 421 EF  H-Bb H-Mj L-Bb 
Ets Domain P43268_342-421 7e-36 1 CL0123 G 342 421 HI  H-Bb H-Mj L-Bb 
Ets Domain P43268_342-421 6.8e-36 1 CL0123 J 342 421 KL  H-Bb H-Mj L-Bb 
Ets Domain P43268_342-421 6.8e-36 1 CL0123 M 342 421 NO  H-Bb H-Mj L-Bb 
Ets Domain P43268_342-421 7.3e-36 1 CL0123 P 342 421 QR  H-Bb H-Mj L-Bb 
Ets Domain P43268_342-421 7e-36 1 CL0123 S 342 421 TU  H-Bb H-Mj L-Bb 
Ets Domain P43268_342-421 6.8e-36 1 CL0123 V 342 421 WX  H-Bb H-Mj L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/D/G/J/M/P/S/V=338-435 C nuclear chromatin
A/D/G/J/M/P/S/V=338-435 C nucleolus
A/D/G/J/M/P/S/V=338-435 C nucleoplasm
A/D/G/J/M/P/S/V=338-435 C nucleus
A/D/G/J/M/P/S/V=338-435 F DNA-binding transcription activator activity, RNA polymerase II-specific
A/D/G/J/M/P/S/V=338-435 F DNA-binding transcription factor activity, RNA polymerase II-specific
A/D/G/J/M/P/S/V=338-435 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/D/G/J/M/P/S/V=338-435 F sequence-specific double-stranded DNA binding
A/D/G/J/M/P/S/V=338-435 P cell differentiation
A/D/G/J/M/P/S/V=338-435 P positive regulation of keratinocyte differentiation
A/D/G/J/M/P/S/V=338-435 P positive regulation of transcription by RNA polymerase II
A/D/G/J/M/P/S/V=338-435 P regulation of transcription by RNA polymerase II
Sequences
Download file with secondary structure created by Stride  
4uuv.pdb1.pdb:   [ download sequences in FASTA format ]
K (dna): 
Click "SHOW" for view sequence
L (dna): 
Click "SHOW" for view sequence
W (dna): 
Click "SHOW" for view sequence
X (dna): 
Click "SHOW" for view sequence
J (protein): 
Click "SHOW" for view sequence
V (protein): 
Click "SHOW" for view sequence
4uuv.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
Click "SHOW" for view sequence
F (dna): 
Click "SHOW" for view sequence
H (dna): 
Click "SHOW" for view sequence
I (dna): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
G (protein): 
Click "SHOW" for view sequence
4uuv.pdb3.pdb:   [ download sequences in FASTA format ]
N (dna): 
Click "SHOW" for view sequence
O (dna): 
Click "SHOW" for view sequence
T (dna): 
Click "SHOW" for view sequence
U (dna): 
Click "SHOW" for view sequence
M (protein): 
Click "SHOW" for view sequence
S (protein): 
Click "SHOW" for view sequence
4uuv.pdb4.pdb:   [ download sequences in FASTA format ]
B (dna): 
Click "SHOW" for view sequence
C (dna): 
Click "SHOW" for view sequence
Q (dna): 
Click "SHOW" for view sequence
R (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
P (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text