General information
PDB ID 4YG7
Title STRUCTURE OF FL AUTOREPRESSION PROMOTER COMPLEX
PDB header TRANSCRIPTION, TRANSFERASE/DNA
Date 2015-02-25
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.77
Kind dna
Organism ESCHERICHIA COLI (STRAIN K12)
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4yg7.pdb BDECGK RT 0
Biounits:
4yg7.pdb1.pdb BDECGK RT 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
HTH_3 Domain P23873_17-70 6.9e-15 1 CL0123 B 17 70 RT  H-Bb H-Mj L-Bb L-Mj 
HTH_3 Domain P23873_17-70 7.5e-15 1 CL0123 C 17 70 RT  H-Bb H-Mj L-Bb L-Mj 
HipA_C Domain P23874_149-403 2.3e-47 1 CL0016 D 149 403   
Couple_hipA Domain P23874_4-104 2.4e-24 1 No_clan D 4 104   
HTH_3 Domain P23873_17-70 6.9e-15 1 CL0123 E 17 70 RT  H-Bb H-Mj L-Bb 
HTH_3 Domain P23873_17-70 7.5e-15 1 CL0123 G 17 70 RT  H-Bb H-Mj L-Bb L-Mj 
HipA_C Domain P23874_149-403 2.3e-47 1 CL0016 K 149 403 R  H-Bb 
Couple_hipA Domain P23874_4-104 2.3e-24 1 No_clan K 4 104   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
B/C/E/G=4-74 C protein-DNA complex
B/C/E/G=4-74 F bacterial-type RNA polymerase core promoter sequence-specific DNA binding
B/C/E/G=4-74 F DNA-binding transcription repressor activity
B/C/E/G=4-74 F sequence-specific DNA binding
B/C/E/G=4-74 F transcription regulatory region sequence-specific DNA binding
B/C/E/G=4-74 P negative regulation of transcription, DNA-templated
B/C/E/G=4-74 P transcription, DNA-templated
D/K=2-437 C cytosol
D/K=2-437 C protein-DNA complex
D/K=2-437 F ATP binding
D/K=2-437 F DNA-binding transcription repressor activity
D/K=2-437 F magnesium ion binding
D/K=2-437 F protein serine/threonine kinase activity
D/K=2-437 F sequence-specific DNA binding
D/K=2-437 F transcription regulatory region sequence-specific DNA binding
D/K=2-437 P dormancy process
D/K=2-437 P negative regulation of catalytic activity
D/K=2-437 P peptidyl-serine autophosphorylation
D/K=2-437 P response to antibiotic
D/K=2-437 P single-species biofilm formation
Sequences
Download file with secondary structure created by Stride  
4yg7.pdb1.pdb:   [ download sequences in FASTA format ]
R (dna): 
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T (dna): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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G (protein): 
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K (protein): 
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