General information
PDB ID 4YKL
Title HNT3 IN COMPLEX WITH DNA AND GUANOSINE
PDB header HYDROLASE/DNA
Date 2015-03-04
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.25
Kind dna
Organism SYNTHETIC CONSTRUCT
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4ykl.pdb B A 0
Biounits:
4ykl.pdb1.pdb B A 2
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
HIT Domain O74859_44-156 4e-30 1 CL0265 B 44 156 A   
zf-C2HE Domain O74859_170-224 1.6e-10 1 CL0361 B 170 224 A   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
B=33-232 C cytosol
B=33-232 C nucleus
B=33-232 F DNA 5'-adenosine monophosphate hydrolase activity
B=33-232 F DNA-3'-diphospho-5'-guanosine diphosphatase
B=33-232 F double-stranded DNA binding
B=33-232 F double-stranded RNA binding
B=33-232 F GMP binding
B=33-232 F guanosine binding
B=33-232 F mismatched DNA binding
B=33-232 F single-strand break-containing DNA binding
B=33-232 F single-stranded DNA binding
B=33-232 F zinc ion binding
B=33-232 P double-strand break repair
B=33-232 P mismatch repair
B=33-232 P single strand break repair
Sequences
Download file with secondary structure created by Stride  
4ykl.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text