General information
PDB ID 4Z2E
Title QUINOLONE(TROVAFLOXACIN)-DNA CLEAVAGE COMPLEX OF GYRASE FROM S. PNEUMONIAE
PDB header ISOMERASE
Date 2015-03-29
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.46
Kind dna
Organism STREPTOCOCCUS PNEUMONIAE, ESCHERICHIA COLI
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4z2e.pdb ACBD EFHG 0
Biounits:
4z2e.pdb1.pdb ACBD EFHG 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_topoisoIV Family Q8DPM2_30-470 1.2e-158 1 No_clan A 30 470 EFG  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
DNA_topoisoIV Family Q8DPM2_30-470 1.1e-153 1 No_clan B 30 470 GH  H-Bb H-Mj L-Bb L-Mn 
DNA_gyraseB_C Family P0A4M0_587-638 4.2e-22 1 No_clan C 541 638 H  H-Bb 
Toprim Family P0A4M0_428-540 1.3e-18 1 CL0413 C 428 540 FH  H-Bb L-Bb 
DNA_gyraseB_C Family P0A4M0_587-638 5.5e-20 1 No_clan D 541 638 F  H-Bb 
Toprim Family P0A4M0_428-540 1.2e-18 1 CL0413 D 428 540 FHE  H-Bb L-Bb L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=1-493 C chromosome
A/B=1-493 C cytoplasm
A/B=1-493 C DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
A/B=1-493 F ATP binding
A/B=1-493 F DNA binding
A/B=1-493 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
A/B=1-493 P DNA topological change
A/B=1-493 P DNA-dependent DNA replication
C/D=404-648 C chromosome
C/D=404-648 C cytoplasm
C/D=404-648 F ATP binding
C/D=404-648 F DNA binding
C/D=404-648 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
C/D=404-648 F metal ion binding
C/D=404-648 P DNA topological change
C/D=404-648 P DNA-dependent DNA replication
Sequences
Download file with secondary structure created by Stride  
4z2e.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
Click "SHOW" for view sequence
F (dna): 
Click "SHOW" for view sequence
G (dna): 
Click "SHOW" for view sequence
H (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text