General information
PDB ID 4Z53
Title QUINOLONE(TROVAFLOXACIN)-DNA CLEAVAGE COMPLEX OF TOPOISOMERASE IV FROM S. PNEUMONIAE
PDB header ISOMERASE
Date 2015-04-02
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.26
Kind dna
Organism ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4z53.pdb AB EFGH 0
Biounits:
4z53.pdb1.pdb AB EFGH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_topoisoIV Family P72525_28-468 5.4e-146 1 No_clan A 1028 1468 EF  H-Bb S-Bb L-Bb L-Mj L-Mn 
DNA_gyraseB_C Family Q59961_573-634 9.6e-29 1 No_clan A 565 634 F  H-Bb 
Toprim Family Q59961_428-540 2e-17 1 CL0413 A 428 540 EFH  H-Bb S-Bb L-Bb 
DNA_topoisoIV Family P72525_28-468 5.5e-146 1 No_clan B 1028 1468 GH  H-Bb S-Bb L-Bb L-Mj L-Mn 
DNA_gyraseB_C Family Q59961_573-634 7.9e-29 1 No_clan B 567 634 H  H-Bb 
Toprim Family Q59961_428-540 2e-17 1 CL0413 B 428 540 FGH  H-Bb S-Bb L-Bb L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=3-484 C chromosome
A/B=3-484 C extrinsic component of plasma membrane
A/B=3-484 F ATP binding
A/B=3-484 F DNA binding
A/B=3-484 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
A/B=3-484 P chromosome segregation
A/B=3-484 P DNA topological change
A/B=404-643 C chromosome
A/B=404-643 F ATP binding
A/B=404-643 F DNA binding
A/B=404-643 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
A/B=404-643 F metal ion binding
A/B=404-643 P chromosome segregation
A/B=404-643 P DNA topological change
Sequences
Download file with secondary structure created by Stride  
4z53.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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G (dna): 
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H (dna): 
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A (protein): 
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B (protein): 
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