General information
PDB ID 5CBX
Title ANCGR DNA BINDING DOMAIN - (+)GRE COMPLEX
PDB header DNA BINDING PROTEIN/DNA
Date 2015-07-01
Experimental method X-RAY DIFFRACTION
Resolution (A) 2
Kind dna
Organism UNCLASSIFIED, SYNTHETIC CONSTRUCT
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
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Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5cbx.pdb ABEF CDGH 0
Biounits:
5cbx.pdb1.pdb AB CD 1
5cbx.pdb2.pdb EF GH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-C4 Domain P04150_419-488 1.4e-30 1 CL0167 A 419 488 CD  H-Bb H-Mj S-Bb L-Bb 
zf-C4 Domain P04150_419-488 1.6e-30 1 CL0167 B 419 488 CD  H-Bb H-Mj S-Bb S-Mj L-Bb 
zf-C4 Domain P04150_419-488 1.5e-30 1 CL0167 E 419 488 GH  H-Bb H-Mj S-Bb S-Mj L-Bb 
zf-C4 Domain P04150_419-488 1.6e-30 1 CL0167 F 419 488 GH  H-Bb H-Mj S-Bb L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/E/F=415-495 C cytoplasm
A/B/E/F=415-495 C cytosol
A/B/E/F=415-495 C microtubule organizing center
A/B/E/F=415-495 C mitochondrial matrix
A/B/E/F=415-495 C nuclear chromatin
A/B/E/F=415-495 C nuclear speck
A/B/E/F=415-495 C nucleoplasm
A/B/E/F=415-495 C nucleus
A/B/E/F=415-495 C protein-containing complex
A/B/E/F=415-495 C spindle
A/B/E/F=415-495 F core promoter sequence-specific DNA binding
A/B/E/F=415-495 F DNA-binding transcription activator activity, RNA polymerase II-specific
A/B/E/F=415-495 F DNA-binding transcription factor activity
A/B/E/F=415-495 F DNA-binding transcription factor activity, RNA polymerase II-specific
A/B/E/F=415-495 F DNA-binding transcription repressor activity, RNA polymerase II-specific
A/B/E/F=415-495 F glucocorticoid receptor activity
A/B/E/F=415-495 F Hsp90 protein binding
A/B/E/F=415-495 F nuclear receptor activity
A/B/E/F=415-495 F protein kinase binding
A/B/E/F=415-495 F repressing transcription factor binding
A/B/E/F=415-495 F RNA binding
A/B/E/F=415-495 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B/E/F=415-495 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
A/B/E/F=415-495 F sequence-specific double-stranded DNA binding
A/B/E/F=415-495 F steroid binding
A/B/E/F=415-495 F steroid hormone binding
A/B/E/F=415-495 F zinc ion binding
A/B/E/F=415-495 P apoptotic process
A/B/E/F=415-495 P cell cycle
A/B/E/F=415-495 P cell division
A/B/E/F=415-495 P cellular response to dexamethasone stimulus
A/B/E/F=415-495 P cellular response to glucocorticoid stimulus
A/B/E/F=415-495 P cellular response to steroid hormone stimulus
A/B/E/F=415-495 P cellular response to transforming growth factor beta stimulus
A/B/E/F=415-495 P chromatin organization
A/B/E/F=415-495 P chromosome segregation
A/B/E/F=415-495 P negative regulation of transcription by RNA polymerase II
A/B/E/F=415-495 P negative regulation of transcription, DNA-templated
A/B/E/F=415-495 P positive regulation of pri-miRNA transcription by RNA polymerase II
A/B/E/F=415-495 P positive regulation of transcription by RNA polymerase II
A/B/E/F=415-495 P regulation of transcription, DNA-templated
A/B/E/F=415-495 P signal transduction
A/B/E/F=415-495 P transcription initiation from RNA polymerase II promoter
Sequences
Download file with secondary structure created by Stride  
5cbx.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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5cbx.pdb2.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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E (protein): 
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F (protein): 
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