General information
PDB ID 5FD3
Title STRUCTURE OF LIN54 TESMIN DOMAIN BOUND TO DNA
PDB header TRANSCRIPTION/DNA
Date 2015-12-15
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.42
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5fd3.pdb AB CDHI 0
Biounits:
5fd3.pdb1.pdb A HI 1
5fd3.pdb2.pdb B CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
TCR Domain Q6MZP7_597-633 1.2e-12 1 No_clan A 582 633 HI  L-Bb L-Mn 
TCR Domain Q6MZP7_522-558 1.2e-11 1 No_clan A 522 558 HI  L-Bb L-Mn 
TCR Domain Q6MZP7_597-633 5.5e-13 1 No_clan B 581 633 CD  H-Bb L-Bb L-Mn 
TCR Domain Q6MZP7_522-558 1.2e-11 1 No_clan B 522 558 CD  L-Bb L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=515-646 C nucleoplasm
A/B=515-646 C nucleus
A/B=515-646 F metal ion binding
A/B=515-646 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
A/B=515-646 P cell cycle
A/B=515-646 P regulation of cell cycle
A/B=515-646 P regulation of transcription, DNA-templated
Sequences
Download file with secondary structure created by Stride  
5fd3.pdb1.pdb:   [ download sequences in FASTA format ]
H (dna): 
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I (dna): 
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A (protein): 
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5fd3.pdb2.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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B (protein): 
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