General information
PDB ID 5J5Q
Title AMP-PNP-STABILIZED ATPASE DOMAIN OF TOPOISOMERASE IV FROM STREPTOCOCCUS PNEUMONIAE, COMPLEX TYPE II
PDB header ISOMERASE/DNA
Date 2016-04-03
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.83
Kind dna
Organism STREPTOCOCCUS PNEUMONIAE, SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5j5q.pdb ABCD EF 0
Biounits:
5j5q.pdb1.pdb AB EF 1
5j5q.pdb2.pdb CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_gyraseB Domain Q59961_227-398 2.9e-56 1 CL0329 A 227 398 E  H-Bb 
HATPase_c Domain Q59961_36-182 2.8e-21 1 CL0025 A 36 182   
DNA_gyraseB Domain Q59961_227-398 2.9e-56 1 CL0329 B 227 398 EF  H-Bb L-Bb L-Mj 
HATPase_c Domain Q59961_36-182 2.8e-21 1 CL0025 B 36 182   
DNA_gyraseB Domain Q59961_227-398 2.9e-56 1 CL0329 C 227 398   
HATPase_c Domain Q59961_36-182 2.7e-21 1 CL0025 C 36 182   
DNA_gyraseB Domain Q59961_227-398 2.9e-56 1 CL0329 D 227 398   
HATPase_c Domain Q59961_36-182 2.8e-21 1 CL0025 D 36 182   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/C/D=1-402 C chromosome
A/B/C/D=1-402 F ATP binding
A/B/C/D=1-402 F DNA binding
A/B/C/D=1-402 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
A/B/C/D=1-402 F metal ion binding
A/B/C/D=1-402 P chromosome segregation
A/B/C/D=1-402 P DNA topological change
Sequences
Download file with secondary structure created by Stride  
5j5q.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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A (protein): 
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B (protein): 
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5j5q.pdb2.pdb:   [ download sequences in FASTA format ]
C (protein): 
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D (protein): 
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