General information
PDB ID 5OQP
Title CRYSTAL STRUCTURE OF THE S. CEREVISIAE CONDENSIN YCG1-BRN1 SUBCOMPLEX BOUND TO DNA (CRYSTAL FORM I)
PDB header CELL CYCLE
Date 2017-08-14
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.98
Kind dna
Organism SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5oqp.pdb AB CD 0
Biounits:
5oqp.pdb1.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Cnd2 Family P38170_384-524 9e-16 1 No_clan B 385 522 CD  L-Bb L-Mj 
Cnd3 Repeat Q06680_577-860 2.5e-91 1 CL0020 A 577 860 D  H-Bb L-Bb 
HEAT_2 Repeat Q06680_125-213 1.2e-05 0 CL0020 A 119 231 D  H-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=6-932 C condensed chromosome
A=6-932 C cytoplasm
A=6-932 C nuclear condensin complex
A=6-932 F chromatin binding
A=6-932 P cell division
A=6-932 P meiotic chromosome condensation
A=6-932 P meiotic chromosome separation
A=6-932 P mitotic chromosome condensation
A=6-932 P mitotic sister chromatid segregation
A=6-932 P negative regulation of meiotic DNA double-strand break formation
A=6-932 P rDNA condensation
A=6-932 P synaptonemal complex assembly
A=6-932 P tRNA gene clustering
B=384-529 C cytoplasm
B=384-529 C nuclear condensin complex
B=384-529 C nucleus
B=384-529 F chromatin binding
B=384-529 F DNA topoisomerase binding
B=384-529 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activator activity
B=384-529 P cell division
B=384-529 P mitotic chromosome condensation
B=384-529 P mitotic sister chromatid segregation
B=384-529 P tRNA gene clustering
Sequences
Download file with secondary structure created by Stride  
5oqp.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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