General information
PDB ID 5WC9
Title HUMAN PIT-1 AND 4XCATT DNA COMPLEX
PDB header DNA BINDING PROTEIN
Date 2017-06-29
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.15
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5wc9.pdb BAEF CDGH 0
Biounits:
5wc9.pdb1.pdb BA CD 1
5wc9.pdb2.pdb EF GH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Pou Domain P28069_127-198 8.8e-36 1 CL0123 A 4 75 CD  H-Bb H-Mj L-Bb L-Mj 
Homeodomain Domain P28069_217-271 2.4e-18 1 CL0123 A 79 148 CD  H-Bb H-Mj L-Bb L-Mn 
Pou Domain P28069_127-198 8.3e-36 1 CL0123 B 4 75 CD  H-Bb H-Mj L-Bb 
Homeodomain Domain P28069_217-271 7.4e-18 1 CL0123 B 76 148 CD  H-Bb H-Mj L-Bb L-Mn 
Pou Domain P28069_127-198 8.1e-36 1 CL0123 E 4 75 GH  H-Bb H-Mj L-Bb L-Mj 
Homeodomain Domain P28069_217-271 3.6e-18 1 CL0123 E 76 148 GH  H-Bb H-Mj L-Bb L-Mn 
Pou Domain P28069_127-198 8.1e-36 1 CL0123 F 4 75 GH  H-Bb H-Mj L-Bb 
Homeodomain Domain P28069_217-271 6.6e-18 1 CL0123 F 75 148 GH  H-Bb H-Mj L-Bb L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/E/F=124-273 C nuclear chromatin
A/B/E/F=124-273 C nucleus
A/B/E/F=124-273 F chromatin binding
A/B/E/F=124-273 F DNA-binding transcription activator activity, RNA polymerase II-specific
A/B/E/F=124-273 F DNA-binding transcription factor activity
A/B/E/F=124-273 F DNA-binding transcription factor activity, RNA polymerase II-specific
A/B/E/F=124-273 F RNA polymerase II activating transcription factor binding
A/B/E/F=124-273 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B/E/F=124-273 F RNA polymerase II transcription factor binding
A/B/E/F=124-273 F sequence-specific double-stranded DNA binding
A/B/E/F=124-273 P B cell differentiation
A/B/E/F=124-273 P cell differentiation
A/B/E/F=124-273 P cell fate specification
A/B/E/F=124-273 P determination of adult lifespan
A/B/E/F=124-273 P negative regulation of cell population proliferation
A/B/E/F=124-273 P negative regulation of transcription by RNA polymerase II
A/B/E/F=124-273 P positive regulation of cell population proliferation
A/B/E/F=124-273 P positive regulation of inositol trisphosphate biosynthetic process
A/B/E/F=124-273 P positive regulation of multicellular organism growth
A/B/E/F=124-273 P positive regulation of transcription by RNA polymerase II
A/B/E/F=124-273 P regulation of insulin-like growth factor receptor signaling pathway
A/B/E/F=124-273 P regulation of transcription, DNA-templated
A/B/E/F=124-273 P somatotropin secreting cell development
Sequences
Download file with secondary structure created by Stride  
5wc9.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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5wc9.pdb2.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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E (protein): 
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F (protein): 
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