General information
PDB ID 5Z7D
Title P204HINAB-DSDNA COMPLEX STRUCTURE
PDB header IMMUNE SYSTEM
Date 2018-01-28
Experimental method X-RAY DIFFRACTION
Resolution (A) 4.5
Kind dna
Organism MUS MUSCULUS, VACCINIA VIRUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5z7d.pdb ABC IJKL 0
Biounits:
5z7d.pdb1.pdb ABC IJKL 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
HIN Family P0DOV2_225-393 6.5e-75 1 CL0021 A 225 393 IJ  H-Bb L-Bb 
HIN Family P0DOV2_429-595 8.3e-75 1 CL0021 A 429 595   
HIN Family P0DOV2_225-393 6.6e-75 1 CL0021 B 225 393 JL  H-Bb L-Bb 
HIN Family P0DOV2_429-595 8.4e-75 1 CL0021 B 429 595 J  H-Bb 
HIN Family P0DOV2_225-393 6.5e-75 1 CL0021 C 225 393   
HIN Family P0DOV2_429-595 8.3e-75 1 CL0021 C 429 595 K   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/C=216-619 C cytosol
A/B/C=216-619 C nuclear inclusion body
A/B/C=216-619 C nuclear speck
A/B/C=216-619 C nucleolus
A/B/C=216-619 C nucleoplasm
A/B/C=216-619 C nucleus
A/B/C=216-619 F DNA-binding transcription repressor activity, RNA polymerase II-specific
A/B/C=216-619 F double-stranded DNA binding
A/B/C=216-619 F identical protein binding
A/B/C=216-619 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B/C=216-619 F transcription coregulator activity
A/B/C=216-619 F transcription factor binding
A/B/C=216-619 P activation of innate immune response
A/B/C=216-619 P cellular response to interferon-alpha
A/B/C=216-619 P cellular response to interferon-beta
A/B/C=216-619 P inner ear development
A/B/C=216-619 P intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
A/B/C=216-619 P positive regulation of interleukin-1 beta production
A/B/C=216-619 P positive regulation of osteoblast differentiation
A/B/C=216-619 P regulation of transcription by RNA polymerase II
A/B/C=216-619 P response to bacterium
Sequences
Download file with secondary structure created by Stride  
5z7d.pdb1.pdb:   [ download sequences in FASTA format ]
I (dna): 
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J (dna): 
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K (dna): 
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L (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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