General information
PDB ID 5Z9X
Title ARABIDOPSIS SMALL RNA DEGRADING NUCLEASE 1 IN COMPLEX WITH AN RNA SUBSTRATE
PDB header PLANT PROTEIN/RNA
Date 2018-02-05
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.8
Kind rna
Organism ARABIDOPSIS THALIANA
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5z9x.pdb A R 0
Biounits:
5z9x.pdb1.pdb A R 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RNase_T Family A3KPE8_141-291 4.5e-08 1 CL0219 A 141 291 R   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=1-409 C nucleus
A=1-409 F 3'-5' exonuclease activity
A=1-409 F 3'-5'-exoribonuclease activity
A=1-409 F 3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing
A=1-409 F exonuclease activity
A=1-409 F miRNA binding
A=1-409 P miRNA catabolic process
Sequences
Download file with secondary structure created by Stride  
5z9x.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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R (rna): 
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