General information
PDB ID 6BZ1
Title MEF2 CHIMERA D83V MUTANT/DNA COMPLEX
PDB header TRANSCRIPTION/DNA
Date 2017-12-21
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.97
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6bz1.pdb CDAB GHEF 0
Biounits:
6bz1.pdb1.pdb CD GH 1
6bz1.pdb2.pdb AB EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
SRF-TF Domain Q02078_10-57 3.2e-25 1 No_clan A 10 57 E  H-Bb 
SRF-TF Domain Q02078_10-57 3.2e-25 1 No_clan B 10 57 F  H-Bb H-Mj 
SRF-TF Domain Q02078_10-57 3.3e-25 1 No_clan C 10 57 GH  H-Bb H-Mj 
SRF-TF Domain Q02078_10-57 3e-25 1 No_clan D 10 57 H  H-Bb H-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/C/D=1-64, A/B/C/D=92-95 C cytosol
A/B/C/D=1-64, A/B/C/D=92-95 C nuclear chromatin
A/B/C/D=1-64, A/B/C/D=92-95 C nucleoplasm
A/B/C/D=1-64, A/B/C/D=92-95 C nucleus
A/B/C/D=1-64, A/B/C/D=92-95 C transcription regulator complex
A/B/C/D=1-64, A/B/C/D=92-95 F activating transcription factor binding
A/B/C/D=1-64, A/B/C/D=92-95 F chromatin binding
A/B/C/D=1-64, A/B/C/D=92-95 F DNA-binding transcription activator activity, RNA polymerase II-specific
A/B/C/D=1-64, A/B/C/D=92-95 F DNA-binding transcription factor activity
A/B/C/D=1-64, A/B/C/D=92-95 F DNA-binding transcription factor activity, RNA polymerase II-specific
A/B/C/D=1-64, A/B/C/D=92-95 F histone acetyltransferase binding
A/B/C/D=1-64, A/B/C/D=92-95 F histone deacetylase binding
A/B/C/D=1-64, A/B/C/D=92-95 F protein heterodimerization activity
A/B/C/D=1-64, A/B/C/D=92-95 F protein kinase binding
A/B/C/D=1-64, A/B/C/D=92-95 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B/C/D=1-64, A/B/C/D=92-95 F RNA polymerase II transcription factor binding
A/B/C/D=1-64, A/B/C/D=92-95 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
A/B/C/D=1-64, A/B/C/D=92-95 F sequence-specific DNA binding
A/B/C/D=1-64, A/B/C/D=92-95 F SMAD binding
A/B/C/D=1-64, A/B/C/D=92-95 F transcription factor binding
A/B/C/D=1-64, A/B/C/D=92-95 F transcription regulatory region sequence-specific DNA binding
A/B/C/D=1-64, A/B/C/D=92-95 P apoptotic process
A/B/C/D=1-64, A/B/C/D=92-95 P cardiac conduction
A/B/C/D=1-64, A/B/C/D=92-95 P cell differentiation
A/B/C/D=1-64, A/B/C/D=92-95 P cellular response to calcium ion
A/B/C/D=1-64, A/B/C/D=92-95 P dendrite morphogenesis
A/B/C/D=1-64, A/B/C/D=92-95 P ERK5 cascade
A/B/C/D=1-64, A/B/C/D=92-95 P heart development
A/B/C/D=1-64, A/B/C/D=92-95 P MAPK cascade
A/B/C/D=1-64, A/B/C/D=92-95 P mitochondrial genome maintenance
A/B/C/D=1-64, A/B/C/D=92-95 P mitochondrion distribution
A/B/C/D=1-64, A/B/C/D=92-95 P muscle organ development
A/B/C/D=1-64, A/B/C/D=92-95 P negative regulation of transcription by RNA polymerase II
A/B/C/D=1-64, A/B/C/D=92-95 P positive regulation of cardiac muscle hypertrophy
A/B/C/D=1-64, A/B/C/D=92-95 P positive regulation of glucose import
A/B/C/D=1-64, A/B/C/D=92-95 P positive regulation of muscle cell differentiation
A/B/C/D=1-64, A/B/C/D=92-95 P positive regulation of transcription by RNA polymerase II
A/B/C/D=1-64, A/B/C/D=92-95 P transcription, DNA-templated
A/B/C/D=1-64, A/B/C/D=92-95 P ventricular cardiac myofibril assembly
A/B/C/D=65-91 C cell junction
A/B/C/D=65-91 C cytosol
A/B/C/D=65-91 C nuclear chromatin
A/B/C/D=65-91 C nucleoplasm
A/B/C/D=65-91 C nucleus
A/B/C/D=65-91 C transcription regulator complex
A/B/C/D=65-91 F DNA-binding transcription activator activity, RNA polymerase II-specific
A/B/C/D=65-91 F DNA-binding transcription factor activity
A/B/C/D=65-91 F DNA-binding transcription factor activity, RNA polymerase II-specific
A/B/C/D=65-91 F histone deacetylase binding
A/B/C/D=65-91 F protein dimerization activity
A/B/C/D=65-91 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B/C/D=65-91 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
A/B/C/D=65-91 F sequence-specific DNA binding
A/B/C/D=65-91 F sequence-specific double-stranded DNA binding
A/B/C/D=65-91 F transcription factor binding
A/B/C/D=65-91 F transcription regulatory region sequence-specific DNA binding
A/B/C/D=65-91 P cell differentiation
A/B/C/D=65-91 P muscle organ development
A/B/C/D=65-91 P positive regulation of transcription by RNA polymerase II
Sequences
Download file with secondary structure created by Stride  
6bz1.pdb1.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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C (protein): 
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D (protein): 
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6bz1.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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A (protein): 
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B (protein): 
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