General information
PDB ID 6E93
Title CRYSTAL STRUCTURE OF ZBTB38 C-TERMINAL ZINC FINGERS 6-9 IN COMPLEX WITH METHYLATED DNA
PDB header DNA BINDING PROTEIN/DNA
Date 2018-07-31
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.75
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6e93.pdb A CD 0
Biounits:
6e93.pdb1.pdb A CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-C2H2_11 Domain Q8NAP3_1036-1057 4.6e-07 1 CL0361 A 1035 1061 CD  H-Bb H-Mj S-Bb L-Bb L-Mj 
zf-met Domain Q8NAP3_1008-1028 2.9e-05 1 CL0361 A 1010 1030 CD  H-Bb H-Mj S-Bb 
zf-C2H2 Domain Q8NAP3_1038-1060 0.00011 1 CL0361 A 1066 1088 CD  H-Bb H-Mj S-Bb L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=1006-1124 C blood microparticle
A=1006-1124 C chromosome
A=1006-1124 C nucleoplasm
A=1006-1124 C nucleus
A=1006-1124 F DNA binding
A=1006-1124 F DNA-binding transcription factor activity
A=1006-1124 F metal ion binding
A=1006-1124 F methyl-CpG binding
A=1006-1124 F protein homodimerization activity
A=1006-1124 P cellular response to DNA damage stimulus
A=1006-1124 P negative regulation of transcription, DNA-templated
A=1006-1124 P positive regulation of transcription by RNA polymerase II
A=1006-1124 P regulation of DNA replication
A=1006-1124 P regulation of transcription, DNA-templated
Sequences
Download file with secondary structure created by Stride  
6e93.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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