General information
PDB ID 6FQM
Title 3.06A COMPLEX OF S.AUREUS GYRASE WITH IMIDAZOPYRAZINONE T1 AND DNA
PDB header ISOMERASE
Date 2018-02-14
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.06
Kind dna
Organism STAPHYLOCOCCUS AUREUS SUBSP. AUREUS N315, SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6fqm.pdb BADCbadc EFef 0
Biounits:
6fqm.pdb1.pdb BADC EF 1
6fqm.pdb2.pdb badc ef 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_topoisoIV Family Q99XG5_33-474 6e-154 1 No_clan A 33 474 EF   
DNA_topoisoIV Family Q99XG5_33-474 8.1e-153 1 No_clan a 33 474 ef   
Toprim Family P66937_430-542 6.9e-13 1 CL0413 B 430 542 EF   
Toprim Family P66937_430-542 1e-12 1 CL0413 b 429 542 ef   
DNA_gyraseB_C Family P66937_592-634 2.1e-11 1 No_clan B 540 634 E   
DNA_gyraseB_C Family P66937_592-634 5.6e-11 1 No_clan b 535 634 e   
DNA_topoisoIV Family Q99XG5_33-474 4.9e-154 1 No_clan c 33 474 ef   
DNA_topoisoIV Family Q99XG5_33-474 6e-154 1 No_clan C 33 474 EF   
Toprim Family P66937_430-542 3.5e-13 1 CL0413 d 430 603 ef   
Toprim Family P66937_430-542 8.5e-13 1 CL0413 D 430 542 EF   
DNA_gyraseB_C Family P66937_580-634 5e-11 1 No_clan D 540 634 F   
DNA_gyraseB_C Family P66937_603-634 6.2e-09 1 No_clan d 540 634 f   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/C/a/c=2-491 C chromosome
A/C/a/c=2-491 C cytoplasm
A/C/a/c=2-491 F ATP binding
A/C/a/c=2-491 F DNA binding
A/C/a/c=2-491 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
A/C/a/c=2-491 P DNA topological change
A/C/a/c=2-491 P DNA-dependent DNA replication
A/C/a/c=2-491 P response to antibiotic
Sequences
Download file with secondary structure created by Stride  
6fqm.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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6fqm.pdb2.pdb:   [ download sequences in FASTA format ]
e (dna): 
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f (dna): 
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a (protein): 
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b (protein): 
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c (protein): 
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d (protein): 
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