General information
PDB ID 6FQP
Title CRYSTAL STRUCTURE OF TALE HOMEOBOX DOMAIN TRANSCRIPTION FACTOR TGIF1 WITH ITS CONSENSUS DNA
PDB header TRANSCRIPTION
Date 2018-02-14
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.42
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6fqp.pdb AB LM 0
Biounits:
6fqp.pdb1.pdb AB LM 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Homeobox_KN Family Q15583_182-221 1.5e-18 1 CL0123 A 182 221 LM  H-Bb H-Mj L-Bb 
Homeobox_KN Family Q15583_182-221 1.4e-18 1 CL0123 B 182 221 LM  H-Bb H-Mj L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=150-248 C nuclear chromatin
A/B=150-248 C nucleoplasm
A/B=150-248 F co-SMAD binding
A/B=150-248 F DNA-binding transcription factor activity
A/B=150-248 F DNA-binding transcription factor activity, RNA polymerase II-specific
A/B=150-248 F DNA-binding transcription repressor activity, RNA polymerase II-specific
A/B=150-248 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B=150-248 F sequence-specific double-stranded DNA binding
A/B=150-248 P cellular response to growth factor stimulus
A/B=150-248 P negative regulation of transcription by RNA polymerase II
A/B=150-248 P response to drug
Sequences
Download file with secondary structure created by Stride  
6fqp.pdb1.pdb:   [ download sequences in FASTA format ]
L (dna): 
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M (dna): 
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A (protein): 
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B (protein): 
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