General information
PDB ID 6FWK
Title THE CRYSTAL STRUCTURE OF POL2CORE-M644G IN COMPLEX WITH DNA AND AN INCOMING NUCLEOTIDE
PDB header DNA BINDING PROTEIN
Date 2018-03-06
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.5
Kind dna
Organism SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6fwk.pdb AB PTCD 0
Biounits:
6fwk.pdb1.pdb A PT 1
6fwk.pdb2.pdb B CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol_B_exo1 Family P21951_121-442 6.3e-85 1 CL0219 A 121 442 P  H-Bb 
DNA_pol_B Family P21951_634-1106 6.1e-12 1 CL0194 A 635 1107 PT  H-Bb S-Bb L-Bb L-Mn 
DNA_pol_B_exo1 Family P21951_121-442 4.7e-85 1 CL0219 B 121 442 C  H-Bb 
DNA_pol_B Family P21951_634-1106 5e-12 1 CL0194 B 635 1119 CD  H-Bb S-Bb L-Bb L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=1-1186 C epsilon DNA polymerase complex
A/B=1-1186 C replication fork
A/B=1-1186 F 4 iron, 4 sulfur cluster binding
A/B=1-1186 F DNA binding
A/B=1-1186 F DNA-directed DNA polymerase activity
A/B=1-1186 F double-stranded DNA binding
A/B=1-1186 F mRNA binding
A/B=1-1186 F nucleotide binding
A/B=1-1186 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
A/B=1-1186 F single-stranded DNA binding
A/B=1-1186 F SUMO binding
A/B=1-1186 F zinc ion binding
A/B=1-1186 P base-excision repair
A/B=1-1186 P base-excision repair, gap-filling
A/B=1-1186 P DNA replication proofreading
A/B=1-1186 P DNA-dependent DNA replication
A/B=1-1186 P double-strand break repair
A/B=1-1186 P double-strand break repair via nonhomologous end joining
A/B=1-1186 P error-prone translesion synthesis
A/B=1-1186 P gene conversion
A/B=1-1186 P heterochromatin organization involved in chromatin silencing
A/B=1-1186 P intra-S DNA damage checkpoint
A/B=1-1186 P leading strand elongation
A/B=1-1186 P mitotic cell cycle
A/B=1-1186 P mitotic DNA replication checkpoint
A/B=1-1186 P mitotic sister chromatid cohesion
A/B=1-1186 P nucleotide-excision repair, DNA gap filling
Sequences
Download file with secondary structure created by Stride  
6fwk.pdb1.pdb:   [ download sequences in FASTA format ]
P (dna): 
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T (dna): 
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A (protein): 
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6fwk.pdb2.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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B (protein): 
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