General information
PDB ID 6IPF
Title POST-CATALYTIC COMPLEX OF HUMAN DNA POLYMERASE MU WITH TEMPLATING CYTOSINE AND MN-8OXODGMP
PDB header TRANSFERASE/DNA
Date 2018-11-03
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.77
Kind dna
Organism HOMO SAPIENS, SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6ipf.pdb A TPD 0
Biounits:
6ipf.pdb1.pdb A TPD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol_lambd_f Domain Q9NP87_238-287 1.5e-20 1 CL0198 A 238 287 P   
DNA_pol_B_palm Domain Q9NP87_290-387 9e-11 1 CL0260 A 290 424 PT   
HHH_8 Domain Q9NP87_153-218 6e-10 1 CL0198 A 153 218 DT   
DNA_pol_B_thumb Family Q9NP87_430-493 1.6e-21 1 No_clan A 430 493 TP   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=132-397, A=411-494 C nucleoplasm
A=132-397, A=411-494 C nucleus
A=132-397, A=411-494 F DNA binding
A=132-397, A=411-494 F DNA-directed DNA polymerase activity
A=132-397, A=411-494 F metal ion binding
A=132-397, A=411-494 P B cell differentiation
A=132-397, A=411-494 P DNA recombination
A=132-397, A=411-494 P double-strand break repair via nonhomologous end joining
A=132-397, A=411-494 P somatic hypermutation of immunoglobulin genes
Sequences
Download file with secondary structure created by Stride  
6ipf.pdb1.pdb:   [ download sequences in FASTA format ]
D (dna): 
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P (dna): 
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T (dna): 
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A (protein): 
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