General information
PDB ID 6KDV
Title CRYSTAL STRUCTURE OF TTCAS1-DNA COMPLEX
PDB header DNA BINDING PROTEIN/DNA
Date 2019-07-02
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.11
Kind dna
Organism SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6kdv.pdb BADC EFGH 0
Biounits:
6kdv.pdb1.pdb BA GH 1
6kdv.pdb2.pdb DC EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Cas_Cas1 Family Q53WG8_122-249 2.9e-08 1 No_clan A 118 254 G   
Cas_Cas1 Family Q53WG8_122-249 2.8e-08 1 No_clan B 118 258   
Cas_Cas1 Family Q53WG8_122-249 3.8e-08 1 No_clan C 118 253 E   
Cas_Cas1 Family Q53WG8_122-249 2.7e-08 1 No_clan D 118 258   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/C/D=1-325 F DNA binding
A/B/C/D=1-325 F endodeoxyribonuclease activity
A/B/C/D=1-325 F metal ion binding
A/B/C/D=1-325 P defense response to virus
A/B/C/D=1-325 P maintenance of CRISPR repeat elements
Sequences
Download file with secondary structure created by Stride  
6kdv.pdb1.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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A (protein): 
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B (protein): 
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6kdv.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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C (protein): 
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D (protein): 
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