General information
PDB ID 6LA9
Title 349 BP DI-NUCLEOSOME HARBORING COHESIVE DNA TERMINI ASSEMBLED WITH LINKER HISTONE H1.0 (HIGH CRYOPROTECTANT)
PDB header DNA BINDING PROTEIN
Date 2019-11-12
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.7
Kind dna
Organism HOMO SAPIENS, OTHER SEQUENCES
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6la9.pdb ABCDEFGHKLMNOPQRST IJ 0
Biounits:
6la9.pdb1.pdb ABCDEFGHKLMNOPQRST IJ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Histone Domain P68431_38-132 4.9e-47 1 CL0012 A 37 131 IJ  H-Bb H-Mj S-Bb L-Bb L-Mn 
CENP-T_C Domain P62805_26-99 4.6e-08 1 CL0012 B 26 98 IJ  S-Bb L-Bb 
Histone Domain P04908_17-91 3.3e-16 1 CL0012 C 13 90 IJ  H-Bb S-Bb L-Bb 
Histone Domain P06899_32-102 5.7e-22 1 CL0012 D 31 101 IJ  H-Bb S-Bb L-Bb 
Histone Domain P68431_38-132 1.1e-46 1 CL0012 E 38 131 IJ  H-Bb H-Mj S-Bb L-Bb 
CENP-T_C Domain P62805_26-99 4.7e-08 1 CL0012 F 25 98 IJ  S-Bb L-Bb 
Histone Domain P04908_17-91 3.3e-16 1 CL0012 G 13 90 IJ  H-Bb S-Bb L-Bb 
Histone Domain P06899_32-102 5.7e-22 1 CL0012 H 31 101 IJ  H-Bb S-Bb L-Bb 
Histone Domain P68431_38-132 4.9e-47 1 CL0012 K 37 131 IJ  H-Bb H-Mj S-Bb L-Bb L-Mn 
CENP-T_C Domain P62805_26-99 4.6e-08 1 CL0012 L 26 98 IJ  S-Bb L-Bb 
Histone Domain P04908_17-91 3.3e-16 1 CL0012 M 13 90 IJ  H-Bb S-Bb L-Bb 
Histone Domain P06899_32-102 5.7e-22 1 CL0012 N 31 101 IJ  H-Bb S-Bb L-Bb 
Histone Domain P68431_38-132 1.1e-46 1 CL0012 O 38 131 IJ  H-Bb H-Mj S-Bb L-Bb 
CENP-T_C Domain P62805_26-99 4.6e-08 1 CL0012 P 26 98 IJ  S-Bb L-Bb 
Histone Domain P04908_17-91 5.1e-16 1 CL0012 Q 15 90 IJ  H-Bb S-Bb L-Bb 
Histone Domain P06899_32-102 5.7e-22 1 CL0012 R 31 101 IJ  H-Bb S-Bb L-Bb 
Linker_histone Domain P07305_25-96 6.2e-29 1 CL0123 S 25 96 IJ  L-Bb 
Linker_histone Domain P07305_25-96 6.5e-29 1 CL0123 T 25 96 IJ  H-Bb S-Bb S-Mn L-Bb L-Mj 
Histone_H2A_C Family P04908_92-119 2.4e-17 1 No_clan C 91 118   
Histone_H2A_C Family P04908_92-119 2.4e-17 1 No_clan G 91 118   
Histone_H2A_C Family P04908_92-119 2.4e-17 1 No_clan M 91 118   
Histone_H2A_C Family P04908_92-119 6.1e-19 1 No_clan Q 91 120   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6la9.pdb1.pdb:   [ download sequences in FASTA format ]
I (dna): 
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J (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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K (protein): 
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L (protein): 
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M (protein): 
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N (protein): 
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O (protein): 
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P (protein): 
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Q (protein): 
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R (protein): 
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S (protein): 
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T (protein): 
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