General information
PDB ID 6M6B
Title CRYO-EM STRUCTURE OF THERMUS THERMOPHILUS MFD IN COMPLEX WITH RNA POLYMERASE AND ATP-GAMMA-S
PDB header TRANSCRIPTION
Date 2020-03-14
Experimental method ELECTRON MICROSCOPY
Resolution (A) 4.1
Kind dna
Organism THERMUS THERMOPHILUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6m6b.pdb ABCDEM TN 0
Biounits:
6m6b.pdb1.pdb ABCDEM TN 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RNA_pol_A_bac Domain Q5SHR6_52-180 2e-25 1 No_clan A 52 180   
RNA_pol_L Domain Q5SHR6_26-222 1.1e-21 1 CL0509 A 26 222   
RNA_pol_A_bac Domain Q5SHR6_52-180 1.9e-25 1 No_clan B 52 180   
RNA_pol_L Domain Q5SHR6_26-222 1e-21 1 CL0509 B 26 222   
RNA_pol_Rpb2_6 Domain Q8RQE9_596-1026 6.9e-151 1 CL0410 C 596 1026   
RNA_pol_Rpb2_3 Domain Q8RQE9_393-461 5.1e-28 1 No_clan C 393 461   
RNA_pol_Rpb2_7 Domain Q8RQE9_1028-1104 8.4e-26 1 No_clan C 1028 1104   
RNA_pol_Rpb2_45 Domain Q8RQE9_471-535 1.9e-24 1 No_clan C 471 535   
RNA_pol_Rpb2_2 Domain Q8RQE9_142-334 6.5e-11 1 No_clan C 142 334   
RNA_pol_Rpb1_1 Domain 8.8e-83 1 No_clan D 3 618 T
RNA_pol_Rpb1_2 Domain Q8RQE8_620-765 1.1e-35 1 No_clan D 620 765   
RNA_pol_Rpb1_5 Domain Q8RQE8_1064-1296 1.1e-32 1 No_clan D 1064 1255   
RNA_pol_Rpb1_3 Domain Q8RQE8_768-954 7.6e-29 1 No_clan D 768 954   
RNA_pol_Rpb1_5 Domain Q8RQE8_1266-1432 5.5e-14 1 No_clan D 1258 1432   
RNA_pol_Rpb1_4 Domain Q8RQE8_983-1069 7.8e-14 1 No_clan D 983 1069   
DEAD Domain Q72KB4_444-607 2.9e-17 1 CL0023 M 444 607 NT  H-Bb L-Bb 
Helicase_C Domain Q72KB4_638-749 3.8e-14 1 CL0023 M 638 749 T  L-Bb 
RNA_pol_Rpb2_1 Family Q8RQE9_17-380 7.5e-39 1 No_clan C 17 380   
RNA_pol_Rpb6 Family Q8RQE7_8-75 1.4e-07 1 No_clan E 8 75   
CarD_CdnL_TRCF Family Q72KB4_322-414 3.6e-14 1 CL0123 M 322 420   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6m6b.pdb1.pdb:   [ download sequences in FASTA format ]
N (dna): 
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T (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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M (protein): 
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