General information
PDB ID 6RAZ
Title D. MELANOGASTER CMG-DNA, STATE 2B
PDB header HYDROLASE
Date 2019-04-08
Experimental method ELECTRON MICROSCOPY
Resolution (A) 4.46
Kind dna
Organism DROSOPHILA MELANOGASTER
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6raz.pdb AHLMN256347 XY 0
Biounits:
6raz.pdb1.pdb AHLMN256347 XY 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
MCM Domain P49735_445-668 1.9e-92 1 CL0023 2 445 668 X   
MCM_lid Domain P49735_695-779 1.4e-28 1 CL0671 2 695 779   
MCM_OB Domain P49735_278-407 5.2e-18 1 CL0021 2 315 407   
MCM_N Domain P49735_181-272 3.7e-17 1 No_clan 2 181 271   
MCM Domain Q9XYU1_277-500 2.5e-86 1 CL0023 3 277 500 X   
MCM_OB Domain Q9XYU1_107-242 6e-28 1 CL0021 3 107 242   
MCM_lid Domain Q9XYU1_560-644 5e-21 1 CL0671 3 560 643   
MCM_N Domain Q9XYU1_4-101 1.3e-07 1 No_clan 3 6 110   
MCM Domain Q26454_447-672 4e-98 1 CL0023 4 447 672 X   
MCM_OB Domain Q26454_273-401 2.4e-38 1 CL0021 4 273 401   
MCM_lid Domain Q26454_687-771 2.5e-27 1 CL0671 4 687 771   
MCM_N Domain Q26454_165-267 5.4e-15 1 No_clan 4 165 287   
MCM Domain Q9VGW6_315-537 1.5e-88 1 CL0023 5 315 537 X   
MCM_OB Domain Q9VGW6_131-268 2e-34 1 CL0021 5 131 268 X   
MCM_N Domain Q9VGW6_31-125 1.3e-16 1 No_clan 5 31 128   
MCM_lid Domain Q9VGW6_556-647 1.1e-10 1 CL0671 5 574 647   
MCM Domain Q9V461_325-548 6.1e-104 1 CL0023 6 325 548 X   
MCM_OB Domain Q9V461_116-246 3.8e-36 1 CL0021 6 116 246   
MCM_lid Domain Q9V461_562-648 1.8e-26 1 CL0671 6 562 648   
MCM_N Domain Q9V461_22-124 8.8e-15 1 No_clan 6 22 125   
MCM Domain Q9XYU0_320-541 4.8e-101 1 CL0023 7 321 541 X   
MCM_OB Domain Q9XYU0_148-281 5.6e-35 1 CL0021 7 148 281   
MCM_lid Domain Q9XYU0_557-641 4.7e-22 1 CL0671 7 557 641   
MCM_N Domain Q9XYU0_10-140 2.8e-16 1 No_clan 7 10 147   
SLD5_C Domain Q9VBI1_175-228 4.6e-12 1 No_clan N 175 228   
CDC45 Family 3e-96 1 No_clan A 132 572
CDC45 Family 4.8e-32 1 No_clan A 19 198
Sld5 Family Q9VQY9_42-153 2.3e-19 1 No_clan L 42 153   
Sld5 Family Q9W2V7_52-158 1.4e-09 1 No_clan M 52 169   
Sld5 Family Q9VBI1_22-138 9.8e-08 1 No_clan N 23 138   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
2=1-887 C CMG complex
2=1-887 C MCM complex
2=1-887 C nucleus
2=1-887 F ATP binding
2=1-887 F DNA helicase activity
2=1-887 F DNA replication origin binding
2=1-887 F metal ion binding
2=1-887 F single-stranded DNA binding
2=1-887 P cell division
2=1-887 P chromosome condensation
2=1-887 P DNA replication
2=1-887 P DNA unwinding involved in DNA replication
2=1-887 P double-strand break repair via break-induced replication
2=1-887 P mitotic DNA replication initiation
2=1-887 P negative regulation of DNA helicase activity
2=1-887 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
3=1-819 C CMG complex
3=1-819 C MCM complex
3=1-819 C nucleus
3=1-819 F ATP binding
3=1-819 F DNA helicase activity
3=1-819 F DNA replication origin binding
3=1-819 F single-stranded DNA binding
3=1-819 P DNA strand elongation involved in DNA replication
3=1-819 P double-strand break repair via break-induced replication
3=1-819 P mitotic DNA replication initiation
3=1-819 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
4=1-866 C CMG complex
4=1-866 C MCM complex
4=1-866 C nucleus
4=1-866 F ATP binding
4=1-866 F DNA helicase activity
4=1-866 F DNA replication origin binding
4=1-866 F single-stranded DNA binding
4=1-866 P DNA replication
4=1-866 P DNA strand elongation involved in DNA replication
4=1-866 P DNA unwinding involved in DNA replication
4=1-866 P double-strand break repair via break-induced replication
4=1-866 P mitotic DNA replication initiation
4=1-866 P mitotic spindle organization
4=1-866 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
5=1-733 C CMG complex
5=1-733 C cytosol
5=1-733 C MCM complex
5=1-733 C nucleus
5=1-733 F ATP binding
5=1-733 F DNA helicase activity
5=1-733 F DNA replication origin binding
5=1-733 F single-stranded DNA binding
5=1-733 P chromosome condensation
5=1-733 P DNA endoreduplication
5=1-733 P DNA replication initiation
5=1-733 P double-strand break repair via break-induced replication
5=1-733 P meiotic cell cycle
5=1-733 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
5=1-733 P resolution of meiotic recombination intermediates
6=1-817 C CMG complex
6=1-817 C MCM complex
6=1-817 C nucleus
6=1-817 F ATP binding
6=1-817 F DNA helicase activity
6=1-817 F DNA replication origin binding
6=1-817 F metal ion binding
6=1-817 F single-stranded DNA binding
6=1-817 P cell division
6=1-817 P DNA replication
6=1-817 P DNA replication initiation
6=1-817 P DNA unwinding involved in DNA replication
6=1-817 P double-strand break repair via break-induced replication
6=1-817 P eggshell chorion gene amplification
6=1-817 P mitotic DNA replication
6=1-817 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
7=1-720 C CMG complex
7=1-720 C MCM complex
7=1-720 C nucleus
7=1-720 F ATP binding
7=1-720 F DNA helicase activity
7=1-720 F DNA replication origin binding
7=1-720 F single-stranded DNA binding
7=1-720 P DNA replication initiation
7=1-720 P DNA strand elongation involved in DNA replication
7=1-720 P DNA unwinding involved in DNA replication
7=1-720 P double-strand break repair via break-induced replication
7=1-720 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
L=1-203 C CMG complex
L=1-203 C GINS complex
L=1-203 C nucleus
L=1-203 C replication fork protection complex
L=1-203 P chromosome condensation
L=1-203 P DNA duplex unwinding
L=1-203 P DNA replication initiation
L=1-203 P DNA strand elongation involved in DNA replication
L=1-203 P double-strand break repair via break-induced replication
L=1-203 P regulation of DNA-templated transcription, elongation
Sequences
Download file with secondary structure created by Stride  
6raz.pdb1.pdb:   [ download sequences in FASTA format ]
X (dna): 
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Y (dna): 
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2 (protein): 
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3 (protein): 
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4 (protein): 
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5 (protein): 
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6 (protein): 
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7 (protein): 
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A (protein): 
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H (protein): 
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L (protein): 
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M (protein): 
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N (protein): 
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