General information
PDB ID 6RWL
Title SIVRCM INTASOME
PDB header RECOMBINATION
Date 2019-06-05
Experimental method ELECTRON MICROSCOPY
Resolution (A) 3.36
Kind dna
Organism SIMIAN IMMUNODEFICIENCY VIRUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6rwl.pdb ABCDFMIJKLNE TSWQ 0
Biounits:
6rwl.pdb1.pdb ABCDFMIJKLNE TSWQ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
IN_DBD_C Domain E1ANT8_959-1002 1.3e-16 1 CL0010 A 225 268   
Integrase_Zn Domain E1ANT8_742-778 8.5e-15 1 No_clan A 8 45 W  H-Bb 
rve Domain E1ANT8_788-879 4.4e-14 1 CL0219 A 54 145 ST   
IN_DBD_C Domain E1ANT8_959-1002 1.1e-16 1 CL0010 B 225 268   
Integrase_Zn Domain E1ANT8_742-778 9.3e-15 1 No_clan B 8 57   
rve Domain E1ANT8_791-874 5.8e-12 1 CL0219 B 43 153   
Integrase_Zn Domain E1ANT8_742-778 2e-14 1 No_clan C 8 58   
rve Domain E1ANT8_791-874 3.3e-12 1 CL0219 C 41 152   
IN_DBD_C Domain E1ANT8_959-1002 8.3e-17 1 CL0010 D 225 268 S  L-Bb 
rve Domain E1ANT8_791-874 5.6e-12 1 CL0219 D 57 153   
Integrase_Zn Domain E1ANT8_742-778 1.9e-16 1 No_clan E 8 45 Q  H-Bb 
IN_DBD_C Domain E1ANT8_959-1002 7.4e-18 1 CL0010 F 225 268 QSW  S-Bb L-Bb 
IN_DBD_C Domain E1ANT8_959-1002 1.3e-16 1 CL0010 I 225 268   
Integrase_Zn Domain E1ANT8_742-778 8.5e-15 1 No_clan I 8 45 T  H-Bb 
rve Domain E1ANT8_788-879 4.4e-14 1 CL0219 I 54 145 QW   
IN_DBD_C Domain E1ANT8_959-1002 1.1e-16 1 CL0010 J 225 268   
Integrase_Zn Domain E1ANT8_742-778 9.3e-15 1 No_clan J 8 57   
rve Domain E1ANT8_791-874 5.8e-12 1 CL0219 J 43 153   
Integrase_Zn Domain E1ANT8_742-778 2e-14 1 No_clan K 8 58   
rve Domain E1ANT8_791-874 3.3e-12 1 CL0219 K 41 152   
IN_DBD_C Domain E1ANT8_959-1002 8.3e-17 1 CL0010 L 225 268 Q  L-Bb 
rve Domain E1ANT8_791-874 5.6e-12 1 CL0219 L 57 153   
Integrase_Zn Domain E1ANT8_742-778 1.9e-16 1 No_clan M 8 45 S  H-Bb 
IN_DBD_C Domain E1ANT8_959-1002 7.4e-18 1 CL0010 N 225 268 QST  S-Bb L-Bb 
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6rwl.pdb1.pdb:   [ download sequences in FASTA format ]
Q (dna): 
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S (dna): 
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T (dna): 
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W (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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I (protein): 
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J (protein): 
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K (protein): 
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L (protein): 
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M (protein): 
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N (protein): 
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