General information
PDB ID 6TYG
Title CRYSTAL STRUCTURE OF MTB SIGMA L TRANSCRIPTION INITIATION COMPLEX WITH 9 NT LONG RNA PRIMER
PDB header TRANSCRIPTION
Date 2019-08-08
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.5
Kind hybrid
Organism MYCOBACTERIUM TUBERCULOSIS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6tyg.pdb FABCDE GH I 0
Biounits:
6tyg.pdb1.pdb FABCDE GH I 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RNA_pol_A_bac Domain P9WGZ1_52-152 6.6e-26 1 No_clan A 52 152   
RNA_pol_L Domain P9WGZ1_24-219 3.4e-19 1 CL0509 A 24 219   
RNA_pol_A_bac Domain P9WGZ1_52-152 7.1e-26 1 No_clan B 52 152   
RNA_pol_L Domain P9WGZ1_24-219 3.8e-19 1 CL0509 B 24 219   
RNA_pol_Rpb2_6 Domain P9WGY9_643-1062 3.4e-150 1 CL0410 C 643 1062 GI   
RNA_pol_Rpb2_3 Domain P9WGY9_438-506 6.6e-28 1 No_clan C 438 506 HIG   
RNA_pol_Rpb2_45 Domain P9WGY9_516-582 1.2e-27 1 No_clan C 516 582   
RNA_pol_Rpb2_2 Domain P9WGY9_181-379 1.5e-26 1 No_clan C 181 379 GH  L-Bb 
RNA_pol_Rpb2_7 Domain P9WGY9_1064-1140 1e-25 1 No_clan C 1064 1140 G   
RNA_pol_Rpb1_1 Domain P9WGY7_4-417 3.6e-82 1 No_clan D 6 417 GH  H-Bb H-Mj L-Bb 
RNA_pol_Rpb1_5 Domain 4.7e-36 1 No_clan D 843 1027 G
RNA_pol_Rpb1_2 Domain P9WGY7_419-561 1.8e-35 1 No_clan D 419 561 IG   
RNA_pol_Rpb1_3 Domain P9WGY7_564-736 4.7e-27 1 No_clan D 564 736   
RNA_pol_Rpb1_5 Domain 9.1e-15 1 No_clan D 1062 1218
RNA_pol_Rpb1_4 Domain P9WGY7_748-843 6.7e-08 1 No_clan D 748 843   
Sigma70_r2 Domain P9WGH5_18-87 4.1e-18 1 CL0123 F 18 102 HI   
Sigma70_r4 Domain P9WGH5_119-168 0.00011 0 CL0123 F 119 168   
RNA_pol_Rpb2_1 Family P9WGY9_52-425 2.5e-21 1 No_clan C 52 425 GH  L-Bb 
RNA_pol_Rpb6 Family P9WGY5_42-105 5.4e-14 1 No_clan E 42 105   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=1-347 C cell wall
A/B=1-347 C cytoplasm
A/B=1-347 C cytosol
A/B=1-347 C plasma membrane
A/B=1-347 F DNA binding
A/B=1-347 F DNA-directed 5'-3' RNA polymerase activity
A/B=1-347 F protein dimerization activity
A/B=1-347 P transcription, DNA-templated
C=1-1178 C cell wall
C=1-1178 C cytosol
C=1-1178 C plasma membrane
C=1-1178 F DNA binding
C=1-1178 F DNA-directed 5'-3' RNA polymerase activity
C=1-1178 F ribonucleoside binding
C=1-1178 P response to antibiotic
C=1-1178 P transcription, DNA-templated
Sequences
Download file with secondary structure created by Stride  
6tyg.pdb1.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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I (rna): 
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