General information
PDB ID 6V8U
Title KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH A MODIFIED KAISO BINDING SEQUENCE (KBS)
PDB header DNA BINDING PROTEIN
Date 2019-12-12
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.1
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6v8u.pdb A DE 0
Biounits:
6v8u.pdb1.pdb A DE 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-H2C2_2 Domain Q86T24_529-552 5.6e-06 0 CL0361 A 537 561 ED  H-Bb H-Mj S-Bb L-Bb 
zf-H2C2_2 Domain Q86T24_499-522 0.00066 0 CL0361 A 508 532 DE  H-Bb H-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=471-604 C cytosol
A=471-604 C nuclear chromatin
A=471-604 C nucleolus
A=471-604 C nucleoplasm
A=471-604 C nucleus
A=471-604 C plasma membrane
A=471-604 F DNA-binding transcription factor activity, RNA polymerase II-specific
A=471-604 F metal ion binding
A=471-604 F methyl-CpG binding
A=471-604 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A=471-604 F sequence-specific DNA binding
A=471-604 F sequence-specific double-stranded DNA binding
A=471-604 P intracellular signal transduction
A=471-604 P negative regulation of transcription, DNA-templated
A=471-604 P regulation of transcription by RNA polymerase II
A=471-604 P Wnt signaling pathway
Sequences
Download file with secondary structure created by Stride  
6v8u.pdb1.pdb:   [ download sequences in FASTA format ]
D (dna): 
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E (dna): 
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A (protein): 
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