General information
PDB ID 6VGD
Title CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN (DBD) OF HUMAN FLI1 AND THE COMPLEX OF THE DBD OF HUMAN RUNX2 WITH CORE BINDING FACTOR BETA (CBFB), IN COMPLEX WITH 16MER DNA CAGAGGATGTGGCTTC
PDB header TRANSCRIPTION
Date 2020-01-07
Experimental method X-RAY DIFFRACTION
Resolution (A) 4.2
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6vgd.pdb ADG BC 0
Biounits:
6vgd.pdb1.pdb ADG BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ets Domain Q01543_282-361 6.2e-36 1 CL0123 A 282 361 BC  H-Bb H-Mj S-Bb L-Bb 
Runt Domain Q13950_111-230 8.9e-72 1 CL0073 D 111 227 BC  S-Bb S-Mj L-Bb L-Mj L-Mn 
CBF_beta Family Q13951_2-135 1.3e-58 1 No_clan G 2 139   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6vgd.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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D (protein): 
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G (protein): 
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