General information
PDB ID 6VGG
Title CRYSTAL STRUCTURE OF THE DNA BINDING DOMAINS OF HUMAN TRANSCRIPTION FACTOR ERG, HUMAN RUNX2 BOUND TO CORE BINDING FACTOR BETA (CBFB), AND MITHRAMYCIN, IN COMPLEX WITH 16MER DNA CAGAGGATGTGGCTTC
PDB header TRANSCRIPTION
Date 2020-01-08
Experimental method X-RAY DIFFRACTION
Resolution (A) 4.31
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6vgg.pdb ADG BC 0
Biounits:
6vgg.pdb1.pdb ADG BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ets Domain P11308_312-391 2.2e-36 1 CL0123 A 312 391 BC  H-Bb H-Mj S-Bb L-Bb 
Runt Domain Q13950_111-230 8.9e-72 1 CL0073 D 111 227 BC  S-Bb S-Mj L-Bb L-Mj L-Mn 
CBF_beta Family Q13951_2-135 1.3e-58 1 No_clan G 2 139   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6vgg.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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D (protein): 
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G (protein): 
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